Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Kdm3aQ6PCM1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Kdm3aQ6PCM1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Kdm3aQ6PCM1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Kdm3aQ6PCM1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kdm3aQ6PCM1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kdm3aQ6PCM1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Kdm3aQ6PCM1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kdm3aQ6PCM1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm3aQ6PCM1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm3aQ6PCM1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Kdm3aQ6PCM1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm3aQ6PCM1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
Kdm3aQ6PCM1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm3aQ6PCM1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm3aQ6PCM1 Gm45906-201ENSMUST00000208911 1430 ntBASIC22.31■■□□□ 1.16
Kdm3aQ6PCM1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm3aQ6PCM1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm3aQ6PCM1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Kdm3aQ6PCM1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm3aQ6PCM1 Gm11249-201ENSMUST00000117071 859 ntBASIC22.31■■□□□ 1.16
Kdm3aQ6PCM1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm3aQ6PCM1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Kdm3aQ6PCM1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Kdm3aQ6PCM1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Kdm3aQ6PCM1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Kdm3aQ6PCM1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Kdm3aQ6PCM1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Kdm3aQ6PCM1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Kdm3aQ6PCM1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Kdm3aQ6PCM1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Kdm3aQ6PCM1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Kdm3aQ6PCM1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Kdm3aQ6PCM1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Kdm3aQ6PCM1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Kdm3aQ6PCM1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
Kdm3aQ6PCM1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Kdm3aQ6PCM1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Kdm3aQ6PCM1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Kdm3aQ6PCM1 Gm22240-201ENSMUST00000175225 82 ntBASIC22.29■■□□□ 1.16
Kdm3aQ6PCM1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Kdm3aQ6PCM1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Kdm3aQ6PCM1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
Kdm3aQ6PCM1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Kdm3aQ6PCM1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Kdm3aQ6PCM1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Kdm3aQ6PCM1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC22.28■■□□□ 1.16
Kdm3aQ6PCM1 Gm18666-201ENSMUST00000190039 958 ntBASIC22.28■■□□□ 1.16
Kdm3aQ6PCM1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Kdm3aQ6PCM1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Kdm3aQ6PCM1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Kdm3aQ6PCM1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC22.27■■□□□ 1.16
Kdm3aQ6PCM1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Kdm3aQ6PCM1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Kdm3aQ6PCM1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Kdm3aQ6PCM1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Kdm3aQ6PCM1 Gm9885-202ENSMUST00000186234 2209 ntBASIC22.27■■□□□ 1.15
Kdm3aQ6PCM1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Kdm3aQ6PCM1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Kdm3aQ6PCM1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Kdm3aQ6PCM1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Kdm3aQ6PCM1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Kdm3aQ6PCM1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Kdm3aQ6PCM1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Kdm3aQ6PCM1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Kdm3aQ6PCM1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Kdm3aQ6PCM1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Kdm3aQ6PCM1 Rncr4-201ENSMUST00000194541 2234 ntBASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Gm11927-201ENSMUST00000118472 759 ntBASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Gm9194-201ENSMUST00000220749 1447 ntBASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Kdm3aQ6PCM1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Kdm3aQ6PCM1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Kdm3aQ6PCM1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Kdm3aQ6PCM1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC22.24■■□□□ 1.15
Kdm3aQ6PCM1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Kdm3aQ6PCM1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC22.24■■□□□ 1.15
Kdm3aQ6PCM1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Kdm3aQ6PCM1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Kdm3aQ6PCM1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Kdm3aQ6PCM1 Gm5643-201ENSMUST00000117081 966 ntBASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms