Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rtl3Q6P1Y1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rtl3Q6P1Y1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Rtl3Q6P1Y1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rtl3Q6P1Y1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rtl3Q6P1Y1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rtl3Q6P1Y1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Rtl3Q6P1Y1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
Rtl3Q6P1Y1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Rtl3Q6P1Y1 Gm20760-201ENSMUST00000179197 648 ntBASIC19.08■□□□□ 0.64
Rtl3Q6P1Y1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Rtl3Q6P1Y1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rtl3Q6P1Y1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Rtl3Q6P1Y1 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.08■□□□□ 0.64
Rtl3Q6P1Y1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtl3Q6P1Y1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtl3Q6P1Y1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rtl3Q6P1Y1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtl3Q6P1Y1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtl3Q6P1Y1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rtl3Q6P1Y1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.07■□□□□ 0.64
Rtl3Q6P1Y1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.07■□□□□ 0.64
Rtl3Q6P1Y1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtl3Q6P1Y1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtl3Q6P1Y1 BC021767-201ENSMUST00000126387 1716 ntBASIC19.07■□□□□ 0.64
Rtl3Q6P1Y1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtl3Q6P1Y1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtl3Q6P1Y1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtl3Q6P1Y1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Rtl3Q6P1Y1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtl3Q6P1Y1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtl3Q6P1Y1 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.06■□□□□ 0.64
Rtl3Q6P1Y1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rtl3Q6P1Y1 Gm5408-201ENSMUST00000197998 747 ntBASIC19.06■□□□□ 0.64
Rtl3Q6P1Y1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Rtl3Q6P1Y1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Rtl3Q6P1Y1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtl3Q6P1Y1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.06■□□□□ 0.64
Rtl3Q6P1Y1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtl3Q6P1Y1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Rtl3Q6P1Y1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rtl3Q6P1Y1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rtl3Q6P1Y1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Rtl3Q6P1Y1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.05■□□□□ 0.64
Rtl3Q6P1Y1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rtl3Q6P1Y1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rtl3Q6P1Y1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rtl3Q6P1Y1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rtl3Q6P1Y1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rtl3Q6P1Y1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Rtl3Q6P1Y1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.05■□□□□ 0.64
Rtl3Q6P1Y1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.05■□□□□ 0.64
Rtl3Q6P1Y1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rtl3Q6P1Y1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rtl3Q6P1Y1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Rtl3Q6P1Y1 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.05■□□□□ 0.64
Rtl3Q6P1Y1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Rtl3Q6P1Y1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Rtl3Q6P1Y1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtl3Q6P1Y1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtl3Q6P1Y1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtl3Q6P1Y1 Iqck-206ENSMUST00000208658 2891 ntBASIC19.04■□□□□ 0.64
Rtl3Q6P1Y1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rtl3Q6P1Y1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Rtl3Q6P1Y1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtl3Q6P1Y1 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.04■□□□□ 0.64
Rtl3Q6P1Y1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtl3Q6P1Y1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rtl3Q6P1Y1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.04■□□□□ 0.64
Rtl3Q6P1Y1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtl3Q6P1Y1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtl3Q6P1Y1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rtl3Q6P1Y1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtl3Q6P1Y1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtl3Q6P1Y1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtl3Q6P1Y1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rtl3Q6P1Y1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtl3Q6P1Y1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtl3Q6P1Y1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtl3Q6P1Y1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtl3Q6P1Y1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtl3Q6P1Y1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtl3Q6P1Y1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtl3Q6P1Y1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.03■□□□□ 0.64
Rtl3Q6P1Y1 Gm22240-201ENSMUST00000175225 82 ntBASIC19.03■□□□□ 0.64
Rtl3Q6P1Y1 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.03■□□□□ 0.64
Rtl3Q6P1Y1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtl3Q6P1Y1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rtl3Q6P1Y1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rtl3Q6P1Y1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rtl3Q6P1Y1 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.02■□□□□ 0.64
Rtl3Q6P1Y1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rtl3Q6P1Y1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rtl3Q6P1Y1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.02■□□□□ 0.64
Rtl3Q6P1Y1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rtl3Q6P1Y1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Rtl3Q6P1Y1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rtl3Q6P1Y1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.02■□□□□ 0.63
Rtl3Q6P1Y1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rtl3Q6P1Y1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms