Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Col11a2Q64739 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col11a2Q64739 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col11a2Q64739 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col11a2Q64739 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col11a2Q64739 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC22.65■■□□□ 1.22
Col11a2Q64739 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col11a2Q64739 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col11a2Q64739 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col11a2Q64739 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col11a2Q64739 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC22.65■■□□□ 1.22
Col11a2Q64739 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Col11a2Q64739 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Col11a2Q64739 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Col11a2Q64739 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Col11a2Q64739 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Col11a2Q64739 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col11a2Q64739 Ank2-226ENSMUST00000189368 339 ntBASIC22.64■■□□□ 1.21
Col11a2Q64739 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col11a2Q64739 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col11a2Q64739 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Col11a2Q64739 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col11a2Q64739 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col11a2Q64739 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Col11a2Q64739 Gm17971-201ENSMUST00000190239 806 ntBASIC22.63■■□□□ 1.21
Col11a2Q64739 AC154471.1-201ENSMUST00000224418 436 ntBASIC22.63■■□□□ 1.21
Col11a2Q64739 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col11a2Q64739 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col11a2Q64739 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col11a2Q64739 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col11a2Q64739 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Col11a2Q64739 Gm9103-201ENSMUST00000119371 405 ntBASIC22.62■■□□□ 1.21
Col11a2Q64739 Gm45058-201ENSMUST00000205810 766 ntBASIC22.62■■□□□ 1.21
Col11a2Q64739 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Col11a2Q64739 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col11a2Q64739 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC22.62■■□□□ 1.21
Col11a2Q64739 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Col11a2Q64739 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col11a2Q64739 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Col11a2Q64739 Gm44544-201ENSMUST00000207052 1844 ntBASIC22.62■■□□□ 1.21
Col11a2Q64739 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Col11a2Q64739 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Col11a2Q64739 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col11a2Q64739 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col11a2Q64739 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col11a2Q64739 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Col11a2Q64739 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
Col11a2Q64739 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC22.6■■□□□ 1.21
Col11a2Q64739 Mir2861-201ENSMUST00000175539 82 ntBASIC22.6■■□□□ 1.21
Col11a2Q64739 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC22.6■■□□□ 1.21
Col11a2Q64739 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC22.6■■□□□ 1.21
Col11a2Q64739 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col11a2Q64739 AC126028.2-201ENSMUST00000228100 1833 ntBASIC22.6■■□□□ 1.21
Col11a2Q64739 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col11a2Q64739 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col11a2Q64739 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Col11a2Q64739 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col11a2Q64739 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC22.6■■□□□ 1.21
Col11a2Q64739 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Col11a2Q64739 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col11a2Q64739 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col11a2Q64739 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col11a2Q64739 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.59■■□□□ 1.21
Col11a2Q64739 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC22.59■■□□□ 1.21
Col11a2Q64739 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col11a2Q64739 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC22.59■■□□□ 1.21
Col11a2Q64739 AC134329.2-201ENSMUST00000217897 428 ntBASIC22.59■■□□□ 1.21
Col11a2Q64739 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col11a2Q64739 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Col11a2Q64739 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col11a2Q64739 Gm10654-201ENSMUST00000098653 1633 ntBASIC22.58■■□□□ 1.21
Col11a2Q64739 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col11a2Q64739 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col11a2Q64739 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
Col11a2Q64739 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col11a2Q64739 Gm12085-201ENSMUST00000119263 940 ntBASIC22.58■■□□□ 1.21
Col11a2Q64739 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC22.58■■□□□ 1.21
Col11a2Q64739 AC166341.7-201ENSMUST00000221698 126 ntBASIC22.58■■□□□ 1.21
Col11a2Q64739 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col11a2Q64739 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col11a2Q64739 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Col11a2Q64739 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Col11a2Q64739 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col11a2Q64739 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col11a2Q64739 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col11a2Q64739 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col11a2Q64739 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Col11a2Q64739 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Col11a2Q64739 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col11a2Q64739 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
Col11a2Q64739 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col11a2Q64739 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col11a2Q64739 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col11a2Q64739 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Col11a2Q64739 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Col11a2Q64739 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Col11a2Q64739 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Col11a2Q64739 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Col11a2Q64739 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col11a2Q64739 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms