Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Scn9aQ62205 Gm7712-202ENSMUST00000222331 1510 ntBASIC22.01■■□□□ 1.11
Scn9aQ62205 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Scn9aQ62205 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Scn9aQ62205 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Scn9aQ62205 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Scn9aQ62205 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC22■■□□□ 1.11
Scn9aQ62205 Gm10138-203ENSMUST00000206952 366 ntBASIC22■■□□□ 1.11
Scn9aQ62205 Gm18032-201ENSMUST00000222541 538 ntBASIC22■■□□□ 1.11
Scn9aQ62205 AC126028.2-201ENSMUST00000228100 1833 ntBASIC22■■□□□ 1.11
Scn9aQ62205 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Scn9aQ62205 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.99■■□□□ 1.11
Scn9aQ62205 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Scn9aQ62205 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Scn9aQ62205 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Scn9aQ62205 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Scn9aQ62205 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Scn9aQ62205 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Scn9aQ62205 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Scn9aQ62205 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.98■■□□□ 1.11
Scn9aQ62205 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Scn9aQ62205 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Scn9aQ62205 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Scn9aQ62205 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Scn9aQ62205 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Scn9aQ62205 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Scn9aQ62205 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Scn9aQ62205 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Scn9aQ62205 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Scn9aQ62205 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Scn9aQ62205 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Scn9aQ62205 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Scn9aQ62205 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Scn9aQ62205 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Scn9aQ62205 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Scn9aQ62205 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Scn9aQ62205 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.97■■□□□ 1.11
Scn9aQ62205 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Scn9aQ62205 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Scn9aQ62205 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.97■■□□□ 1.11
Scn9aQ62205 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Scn9aQ62205 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.97■■□□□ 1.11
Scn9aQ62205 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Scn9aQ62205 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
Scn9aQ62205 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Scn9aQ62205 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Scn9aQ62205 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Scn9aQ62205 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Scn9aQ62205 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Scn9aQ62205 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
Scn9aQ62205 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC21.96■■□□□ 1.11
Scn9aQ62205 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Scn9aQ62205 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Scn9aQ62205 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Scn9aQ62205 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Scn9aQ62205 Gm12382-201ENSMUST00000122005 922 ntBASIC21.95■■□□□ 1.1
Scn9aQ62205 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Scn9aQ62205 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Scn9aQ62205 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Scn9aQ62205 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Scn9aQ62205 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Scn9aQ62205 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Scn9aQ62205 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Scn9aQ62205 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Scn9aQ62205 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn9aQ62205 Gm33142-201ENSMUST00000193913 867 ntBASIC21.94■■□□□ 1.1
Scn9aQ62205 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Scn9aQ62205 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn9aQ62205 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn9aQ62205 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Scn9aQ62205 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Scn9aQ62205 AC159205.6-201ENSMUST00000224935 887 ntBASIC21.94■■□□□ 1.1
Scn9aQ62205 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn9aQ62205 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn9aQ62205 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scn9aQ62205 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scn9aQ62205 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Scn9aQ62205 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scn9aQ62205 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC21.93■■□□□ 1.1
Scn9aQ62205 Gm10013-201ENSMUST00000106074 672 ntBASIC21.93■■□□□ 1.1
Scn9aQ62205 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scn9aQ62205 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scn9aQ62205 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC21.93■■□□□ 1.1
Scn9aQ62205 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.93■■□□□ 1.1
Scn9aQ62205 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scn9aQ62205 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Scn9aQ62205 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Scn9aQ62205 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Scn9aQ62205 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Scn9aQ62205 Gm18959-201ENSMUST00000208954 655 ntBASIC21.92■■□□□ 1.1
Scn9aQ62205 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.92■■□□□ 1.1
Scn9aQ62205 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Scn9aQ62205 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Scn9aQ62205 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Scn9aQ62205 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Scn9aQ62205 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Scn9aQ62205 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Scn9aQ62205 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Scn9aQ62205 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Scn9aQ62205 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms