Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rai1Q61818 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rai1Q61818 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.93■□□□□ 0.46
Rai1Q61818 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rai1Q61818 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rai1Q61818 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rai1Q61818 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rai1Q61818 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rai1Q61818 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rai1Q61818 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rai1Q61818 Gm7889-201ENSMUST00000185591 958 ntBASIC17.92■□□□□ 0.46
Rai1Q61818 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.92■□□□□ 0.46
Rai1Q61818 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Rai1Q61818 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Rai1Q61818 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rai1Q61818 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rai1Q61818 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rai1Q61818 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rai1Q61818 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.92■□□□□ 0.46
Rai1Q61818 Gm42545-201ENSMUST00000202755 922 ntBASIC17.92■□□□□ 0.46
Rai1Q61818 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.92■□□□□ 0.46
Rai1Q61818 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Rai1Q61818 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rai1Q61818 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rai1Q61818 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.91■□□□□ 0.46
Rai1Q61818 Gm10138-203ENSMUST00000206952 366 ntBASIC17.91■□□□□ 0.46
Rai1Q61818 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rai1Q61818 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rai1Q61818 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rai1Q61818 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.91■□□□□ 0.46
Rai1Q61818 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rai1Q61818 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rai1Q61818 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rai1Q61818 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rai1Q61818 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Rai1Q61818 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.9■□□□□ 0.46
Rai1Q61818 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Rai1Q61818 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.9■□□□□ 0.46
Rai1Q61818 Gm30025-201ENSMUST00000218555 728 ntBASIC17.9■□□□□ 0.46
Rai1Q61818 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rai1Q61818 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rai1Q61818 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rai1Q61818 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Rai1Q61818 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.9■□□□□ 0.46
Rai1Q61818 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rai1Q61818 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rai1Q61818 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.9■□□□□ 0.46
Rai1Q61818 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rai1Q61818 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Rai1Q61818 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.9■□□□□ 0.46
Rai1Q61818 Timm23-208ENSMUST00000226683 750 ntBASIC17.9■□□□□ 0.46
Rai1Q61818 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Rai1Q61818 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rai1Q61818 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rai1Q61818 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Rai1Q61818 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rai1Q61818 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rai1Q61818 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.89■□□□□ 0.45
Rai1Q61818 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rai1Q61818 Gm37292-201ENSMUST00000192062 758 ntBASIC17.89■□□□□ 0.45
Rai1Q61818 Gm43183-201ENSMUST00000200632 547 ntBASIC17.89■□□□□ 0.45
Rai1Q61818 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rai1Q61818 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rai1Q61818 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rai1Q61818 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.89■□□□□ 0.45
Rai1Q61818 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.89■□□□□ 0.45
Rai1Q61818 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rai1Q61818 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rai1Q61818 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rai1Q61818 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rai1Q61818 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rai1Q61818 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rai1Q61818 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rai1Q61818 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rai1Q61818 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rai1Q61818 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.88■□□□□ 0.45
Rai1Q61818 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rai1Q61818 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rai1Q61818 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rai1Q61818 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rai1Q61818 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Rai1Q61818 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rai1Q61818 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rai1Q61818 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.88■□□□□ 0.45
Rai1Q61818 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rai1Q61818 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.88■□□□□ 0.45
Rai1Q61818 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Rai1Q61818 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.88■□□□□ 0.45
Rai1Q61818 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Rai1Q61818 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rai1Q61818 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rai1Q61818 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Rai1Q61818 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rai1Q61818 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rai1Q61818 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.87■□□□□ 0.45
Rai1Q61818 Gm11539-201ENSMUST00000119837 557 ntBASIC17.87■□□□□ 0.45
Rai1Q61818 Gm13436-201ENSMUST00000120418 567 ntBASIC17.87■□□□□ 0.45
Rai1Q61818 Odf3b-204ENSMUST00000227834 930 ntBASIC17.87■□□□□ 0.45
Rai1Q61818 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rai1Q61818 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms