Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxc1Q61572 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Foxc1Q61572 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxc1Q61572 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxc1Q61572 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.48□□□□□ -0.25
Foxc1Q61572 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxc1Q61572 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Foxc1Q61572 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxc1Q61572 Gm12933-201ENSMUST00000120203 872 ntBASIC13.48□□□□□ -0.25
Foxc1Q61572 Gm13323-201ENSMUST00000120245 1151 ntBASIC13.48□□□□□ -0.25
Foxc1Q61572 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Foxc1Q61572 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Foxc1Q61572 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxc1Q61572 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxc1Q61572 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.48□□□□□ -0.25
Foxc1Q61572 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.48□□□□□ -0.25
Foxc1Q61572 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Foxc1Q61572 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxc1Q61572 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Foxc1Q61572 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Foxc1Q61572 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxc1Q61572 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxc1Q61572 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC13.47□□□□□ -0.25
Foxc1Q61572 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxc1Q61572 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC13.47□□□□□ -0.25
Foxc1Q61572 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxc1Q61572 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Foxc1Q61572 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.47□□□□□ -0.25
Foxc1Q61572 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.47□□□□□ -0.25
Foxc1Q61572 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.47□□□□□ -0.25
Foxc1Q61572 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxc1Q61572 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxc1Q61572 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Foxc1Q61572 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Foxc1Q61572 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Foxc1Q61572 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxc1Q61572 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxc1Q61572 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxc1Q61572 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Foxc1Q61572 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxc1Q61572 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxc1Q61572 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.47□□□□□ -0.25
Foxc1Q61572 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Foxc1Q61572 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Foxc1Q61572 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Foxc1Q61572 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Foxc1Q61572 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Foxc1Q61572 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Foxc1Q61572 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.46□□□□□ -0.25
Foxc1Q61572 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Foxc1Q61572 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.46□□□□□ -0.25
Foxc1Q61572 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Foxc1Q61572 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Foxc1Q61572 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Foxc1Q61572 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Foxc1Q61572 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.46□□□□□ -0.25
Foxc1Q61572 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Foxc1Q61572 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.46□□□□□ -0.26
Foxc1Q61572 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Foxc1Q61572 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Foxc1Q61572 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxc1Q61572 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Foxc1Q61572 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Foxc1Q61572 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxc1Q61572 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxc1Q61572 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxc1Q61572 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxc1Q61572 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Foxc1Q61572 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Foxc1Q61572 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.45□□□□□ -0.26
Foxc1Q61572 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Foxc1Q61572 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.45□□□□□ -0.26
Foxc1Q61572 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxc1Q61572 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.45□□□□□ -0.26
Foxc1Q61572 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Foxc1Q61572 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxc1Q61572 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Foxc1Q61572 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Foxc1Q61572 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Foxc1Q61572 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Foxc1Q61572 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc1Q61572 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc1Q61572 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Foxc1Q61572 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc1Q61572 Gm13534-201ENSMUST00000121169 513 ntBASIC13.44□□□□□ -0.26
Foxc1Q61572 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc1Q61572 AC073947.1-201ENSMUST00000216991 649 ntBASIC13.44□□□□□ -0.26
Foxc1Q61572 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Foxc1Q61572 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Foxc1Q61572 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Foxc1Q61572 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc1Q61572 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc1Q61572 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc1Q61572 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc1Q61572 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc1Q61572 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Foxc1Q61572 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc1Q61572 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc1Q61572 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc1Q61572 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms