Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.59■□□□□ 0.89
Ecm1Q61508 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ecm1Q61508 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ecm1Q61508 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ecm1Q61508 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ecm1Q61508 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ecm1Q61508 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ecm1Q61508 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ecm1Q61508 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.58■□□□□ 0.89
Ecm1Q61508 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ecm1Q61508 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Ecm1Q61508 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ecm1Q61508 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.58■□□□□ 0.89
Ecm1Q61508 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ecm1Q61508 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Ecm1Q61508 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Ecm1Q61508 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ecm1Q61508 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ecm1Q61508 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ecm1Q61508 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ecm1Q61508 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ecm1Q61508 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ecm1Q61508 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.57■□□□□ 0.88
Ecm1Q61508 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ecm1Q61508 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ecm1Q61508 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ecm1Q61508 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.56■□□□□ 0.88
Ecm1Q61508 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ecm1Q61508 Gm42545-201ENSMUST00000202755 922 ntBASIC20.56■□□□□ 0.88
Ecm1Q61508 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.56■□□□□ 0.88
Ecm1Q61508 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ecm1Q61508 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ecm1Q61508 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ecm1Q61508 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ecm1Q61508 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ecm1Q61508 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ecm1Q61508 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Ecm1Q61508 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ecm1Q61508 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ecm1Q61508 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ecm1Q61508 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.55■□□□□ 0.88
Ecm1Q61508 Gm10231-201ENSMUST00000181584 441 ntBASIC20.55■□□□□ 0.88
Ecm1Q61508 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ecm1Q61508 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.55■□□□□ 0.88
Ecm1Q61508 Gm10175-202ENSMUST00000208752 441 ntBASIC20.55■□□□□ 0.88
Ecm1Q61508 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ecm1Q61508 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ecm1Q61508 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ecm1Q61508 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.54■□□□□ 0.88
Ecm1Q61508 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ecm1Q61508 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ecm1Q61508 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ecm1Q61508 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Ecm1Q61508 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ecm1Q61508 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ecm1Q61508 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ecm1Q61508 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.54■□□□□ 0.88
Ecm1Q61508 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.54■□□□□ 0.88
Ecm1Q61508 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ecm1Q61508 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Ecm1Q61508 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ecm1Q61508 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ecm1Q61508 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.54■□□□□ 0.88
Ecm1Q61508 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ecm1Q61508 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Ecm1Q61508 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.53■□□□□ 0.88
Ecm1Q61508 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.53■□□□□ 0.88
Ecm1Q61508 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ecm1Q61508 Gm37292-201ENSMUST00000192062 758 ntBASIC20.53■□□□□ 0.88
Ecm1Q61508 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.53■□□□□ 0.88
Ecm1Q61508 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.53■□□□□ 0.88
Ecm1Q61508 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ecm1Q61508 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ecm1Q61508 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ecm1Q61508 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ecm1Q61508 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ecm1Q61508 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ecm1Q61508 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ecm1Q61508 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ecm1Q61508 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Ecm1Q61508 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ecm1Q61508 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ecm1Q61508 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.52■□□□□ 0.88
Ecm1Q61508 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ecm1Q61508 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ecm1Q61508 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ecm1Q61508 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ecm1Q61508 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ecm1Q61508 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.51■□□□□ 0.87
Ecm1Q61508 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ecm1Q61508 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.51■□□□□ 0.87
Ecm1Q61508 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ecm1Q61508 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ecm1Q61508 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ecm1Q61508 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ecm1Q61508 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ecm1Q61508 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ecm1Q61508 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ecm1Q61508 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.5■□□□□ 0.87
Ecm1Q61508 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms