Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm10653-202ENSMUST00000139570 835 ntBASIC19.26■□□□□ 0.67
Smarcd1Q61466 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.26■□□□□ 0.67
Smarcd1Q61466 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.26■□□□□ 0.67
Smarcd1Q61466 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcd1Q61466 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcd1Q61466 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.26■□□□□ 0.67
Smarcd1Q61466 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcd1Q61466 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Smarcd1Q61466 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcd1Q61466 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcd1Q61466 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcd1Q61466 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcd1Q61466 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Smarcd1Q61466 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcd1Q61466 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcd1Q61466 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcd1Q61466 Gm22325-201ENSMUST00000158904 308 ntBASIC19.25■□□□□ 0.67
Smarcd1Q61466 Gm2559-201ENSMUST00000201323 363 ntBASIC19.25■□□□□ 0.67
Smarcd1Q61466 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcd1Q61466 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.25■□□□□ 0.67
Smarcd1Q61466 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcd1Q61466 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcd1Q61466 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcd1Q61466 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcd1Q61466 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcd1Q61466 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcd1Q61466 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcd1Q61466 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.24■□□□□ 0.67
Smarcd1Q61466 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcd1Q61466 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.24■□□□□ 0.67
Smarcd1Q61466 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcd1Q61466 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcd1Q61466 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Smarcd1Q61466 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcd1Q61466 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcd1Q61466 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Smarcd1Q61466 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcd1Q61466 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcd1Q61466 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcd1Q61466 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.23■□□□□ 0.67
Smarcd1Q61466 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Smarcd1Q61466 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcd1Q61466 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcd1Q61466 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcd1Q61466 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcd1Q61466 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.22■□□□□ 0.67
Smarcd1Q61466 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Smarcd1Q61466 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcd1Q61466 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcd1Q61466 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.22■□□□□ 0.67
Smarcd1Q61466 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Smarcd1Q61466 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcd1Q61466 Gm12896-201ENSMUST00000118430 226 ntBASIC19.22■□□□□ 0.67
Smarcd1Q61466 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Smarcd1Q61466 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.22■□□□□ 0.67
Smarcd1Q61466 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcd1Q61466 Gm20760-201ENSMUST00000179197 648 ntBASIC19.22■□□□□ 0.67
Smarcd1Q61466 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcd1Q61466 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Smarcd1Q61466 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.22■□□□□ 0.67
Smarcd1Q61466 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcd1Q61466 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcd1Q61466 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcd1Q61466 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.21■□□□□ 0.67
Smarcd1Q61466 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.21■□□□□ 0.67
Smarcd1Q61466 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcd1Q61466 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcd1Q61466 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcd1Q61466 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcd1Q61466 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcd1Q61466 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcd1Q61466 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.21■□□□□ 0.67
Smarcd1Q61466 Gm37856-201ENSMUST00000191634 999 ntBASIC19.21■□□□□ 0.67
Smarcd1Q61466 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcd1Q61466 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.21■□□□□ 0.67
Smarcd1Q61466 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Smarcd1Q61466 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcd1Q61466 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.21■□□□□ 0.67
Smarcd1Q61466 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcd1Q61466 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcd1Q61466 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcd1Q61466 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcd1Q61466 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd1Q61466 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd1Q61466 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd1Q61466 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd1Q61466 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd1Q61466 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd1Q61466 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd1Q61466 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd1Q61466 Gm2399-201ENSMUST00000104944 225 ntBASIC19.2■□□□□ 0.66
Smarcd1Q61466 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd1Q61466 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.2■□□□□ 0.66
Smarcd1Q61466 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.2■□□□□ 0.66
Smarcd1Q61466 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd1Q61466 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd1Q61466 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Smarcd1Q61466 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd1Q61466 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Smarcd1Q61466 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms