Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Slc6a4Q60857 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a4Q60857 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a4Q60857 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a4Q60857 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a4Q60857 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.93■□□□□ 0.62
Slc6a4Q60857 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a4Q60857 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a4Q60857 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a4Q60857 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a4Q60857 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a4Q60857 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a4Q60857 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a4Q60857 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Slc6a4Q60857 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a4Q60857 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a4Q60857 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a4Q60857 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a4Q60857 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a4Q60857 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Slc6a4Q60857 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.92■□□□□ 0.62
Slc6a4Q60857 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a4Q60857 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a4Q60857 Gm2399-201ENSMUST00000104944 225 ntBASIC18.92■□□□□ 0.62
Slc6a4Q60857 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a4Q60857 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.92■□□□□ 0.62
Slc6a4Q60857 Gm11249-201ENSMUST00000117071 859 ntBASIC18.92■□□□□ 0.62
Slc6a4Q60857 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.92■□□□□ 0.62
Slc6a4Q60857 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a4Q60857 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a4Q60857 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a4Q60857 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.92■□□□□ 0.62
Slc6a4Q60857 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a4Q60857 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a4Q60857 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Slc6a4Q60857 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.92■□□□□ 0.62
Slc6a4Q60857 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a4Q60857 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a4Q60857 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a4Q60857 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a4Q60857 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.91■□□□□ 0.62
Slc6a4Q60857 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.91■□□□□ 0.62
Slc6a4Q60857 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a4Q60857 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Slc6a4Q60857 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a4Q60857 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Slc6a4Q60857 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a4Q60857 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a4Q60857 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Slc6a4Q60857 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a4Q60857 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a4Q60857 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Slc6a4Q60857 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a4Q60857 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a4Q60857 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a4Q60857 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Slc6a4Q60857 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a4Q60857 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a4Q60857 BC021767-201ENSMUST00000126387 1716 ntBASIC18.9■□□□□ 0.62
Slc6a4Q60857 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a4Q60857 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a4Q60857 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a4Q60857 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Slc6a4Q60857 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Slc6a4Q60857 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Slc6a4Q60857 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Slc6a4Q60857 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.89■□□□□ 0.61
Slc6a4Q60857 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a4Q60857 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a4Q60857 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a4Q60857 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a4Q60857 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a4Q60857 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.89■□□□□ 0.61
Slc6a4Q60857 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a4Q60857 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a4Q60857 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a4Q60857 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Slc6a4Q60857 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a4Q60857 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Slc6a4Q60857 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a4Q60857 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.88■□□□□ 0.61
Slc6a4Q60857 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a4Q60857 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.88■□□□□ 0.61
Slc6a4Q60857 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a4Q60857 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a4Q60857 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a4Q60857 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a4Q60857 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a4Q60857 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a4Q60857 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a4Q60857 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.87■□□□□ 0.61
Slc6a4Q60857 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a4Q60857 Gm22325-201ENSMUST00000158904 308 ntBASIC18.87■□□□□ 0.61
Slc6a4Q60857 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a4Q60857 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a4Q60857 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a4Q60857 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a4Q60857 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a4Q60857 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a4Q60857 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms