Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ripk1Q60855 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ripk1Q60855 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ripk1Q60855 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ripk1Q60855 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.4■□□□□ 0.38
Ripk1Q60855 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ripk1Q60855 Gm13534-201ENSMUST00000121169 513 ntBASIC17.4■□□□□ 0.38
Ripk1Q60855 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.4■□□□□ 0.38
Ripk1Q60855 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ripk1Q60855 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ripk1Q60855 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ripk1Q60855 Gm42778-201ENSMUST00000199644 553 ntBASIC17.4■□□□□ 0.38
Ripk1Q60855 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ripk1Q60855 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ripk1Q60855 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ripk1Q60855 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ripk1Q60855 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ripk1Q60855 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ripk1Q60855 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ripk1Q60855 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Ripk1Q60855 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.39■□□□□ 0.38
Ripk1Q60855 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ripk1Q60855 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.39■□□□□ 0.38
Ripk1Q60855 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.39■□□□□ 0.37
Ripk1Q60855 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ripk1Q60855 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ripk1Q60855 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ripk1Q60855 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ripk1Q60855 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ripk1Q60855 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ripk1Q60855 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ripk1Q60855 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
Ripk1Q60855 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.39■□□□□ 0.37
Ripk1Q60855 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ripk1Q60855 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ripk1Q60855 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ripk1Q60855 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ripk1Q60855 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ripk1Q60855 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ripk1Q60855 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ripk1Q60855 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.39■□□□□ 0.37
Ripk1Q60855 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.39■□□□□ 0.37
Ripk1Q60855 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ripk1Q60855 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ripk1Q60855 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.38■□□□□ 0.37
Ripk1Q60855 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ripk1Q60855 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ripk1Q60855 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ripk1Q60855 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ripk1Q60855 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ripk1Q60855 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ripk1Q60855 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ripk1Q60855 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ripk1Q60855 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.38■□□□□ 0.37
Ripk1Q60855 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ripk1Q60855 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ripk1Q60855 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ripk1Q60855 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ripk1Q60855 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.37■□□□□ 0.37
Ripk1Q60855 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ripk1Q60855 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ripk1Q60855 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ripk1Q60855 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ripk1Q60855 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.37■□□□□ 0.37
Ripk1Q60855 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ripk1Q60855 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ripk1Q60855 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ripk1Q60855 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ripk1Q60855 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ripk1Q60855 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.37■□□□□ 0.37
Ripk1Q60855 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ripk1Q60855 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ripk1Q60855 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ripk1Q60855 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Ripk1Q60855 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.37■□□□□ 0.37
Ripk1Q60855 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ripk1Q60855 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ripk1Q60855 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ripk1Q60855 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.37■□□□□ 0.37
Ripk1Q60855 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ripk1Q60855 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.37■□□□□ 0.37
Ripk1Q60855 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ripk1Q60855 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ripk1Q60855 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Ripk1Q60855 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ripk1Q60855 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ripk1Q60855 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ripk1Q60855 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
Ripk1Q60855 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ripk1Q60855 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.36■□□□□ 0.37
Ripk1Q60855 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.36■□□□□ 0.37
Ripk1Q60855 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Ripk1Q60855 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ripk1Q60855 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ripk1Q60855 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ripk1Q60855 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ripk1Q60855 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ripk1Q60855 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ripk1Q60855 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ripk1Q60855 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms