Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col12a1Q60847 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Col12a1Q60847 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col12a1Q60847 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col12a1Q60847 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Col12a1Q60847 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Col12a1Q60847 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.42■□□□□ 0.54
Col12a1Q60847 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Col12a1Q60847 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col12a1Q60847 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col12a1Q60847 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col12a1Q60847 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col12a1Q60847 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col12a1Q60847 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col12a1Q60847 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col12a1Q60847 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col12a1Q60847 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.41■□□□□ 0.54
Col12a1Q60847 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.4■□□□□ 0.54
Col12a1Q60847 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col12a1Q60847 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col12a1Q60847 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col12a1Q60847 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Col12a1Q60847 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.4■□□□□ 0.54
Col12a1Q60847 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col12a1Q60847 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col12a1Q60847 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.4■□□□□ 0.54
Col12a1Q60847 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col12a1Q60847 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col12a1Q60847 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Col12a1Q60847 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.4■□□□□ 0.54
Col12a1Q60847 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Col12a1Q60847 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.39■□□□□ 0.54
Col12a1Q60847 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Col12a1Q60847 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col12a1Q60847 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Col12a1Q60847 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Col12a1Q60847 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col12a1Q60847 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col12a1Q60847 Gm10138-203ENSMUST00000206952 366 ntBASIC18.39■□□□□ 0.53
Col12a1Q60847 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col12a1Q60847 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col12a1Q60847 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col12a1Q60847 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col12a1Q60847 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col12a1Q60847 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col12a1Q60847 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col12a1Q60847 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col12a1Q60847 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col12a1Q60847 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Col12a1Q60847 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.38■□□□□ 0.53
Col12a1Q60847 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.38■□□□□ 0.53
Col12a1Q60847 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col12a1Q60847 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col12a1Q60847 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col12a1Q60847 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col12a1Q60847 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col12a1Q60847 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col12a1Q60847 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.38■□□□□ 0.53
Col12a1Q60847 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col12a1Q60847 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col12a1Q60847 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.38■□□□□ 0.53
Col12a1Q60847 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col12a1Q60847 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.38■□□□□ 0.53
Col12a1Q60847 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col12a1Q60847 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.37■□□□□ 0.53
Col12a1Q60847 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col12a1Q60847 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col12a1Q60847 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col12a1Q60847 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Col12a1Q60847 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col12a1Q60847 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.36■□□□□ 0.53
Col12a1Q60847 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col12a1Q60847 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col12a1Q60847 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Col12a1Q60847 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col12a1Q60847 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col12a1Q60847 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col12a1Q60847 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col12a1Q60847 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col12a1Q60847 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
Col12a1Q60847 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Col12a1Q60847 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col12a1Q60847 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col12a1Q60847 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col12a1Q60847 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col12a1Q60847 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Col12a1Q60847 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col12a1Q60847 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col12a1Q60847 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col12a1Q60847 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Col12a1Q60847 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.35■□□□□ 0.53
Col12a1Q60847 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col12a1Q60847 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.35■□□□□ 0.53
Col12a1Q60847 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col12a1Q60847 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col12a1Q60847 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.35■□□□□ 0.53
Col12a1Q60847 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Col12a1Q60847 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col12a1Q60847 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col12a1Q60847 Gm12382-201ENSMUST00000122005 922 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms