Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1h4Q60641 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1h4Q60641 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1h4Q60641 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1h4Q60641 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1h4Q60641 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1h4Q60641 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1h4Q60641 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1h4Q60641 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1h4Q60641 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.59■□□□□ 0.41
Nr1h4Q60641 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1h4Q60641 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1h4Q60641 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1h4Q60641 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1h4Q60641 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1h4Q60641 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.58■□□□□ 0.41
Nr1h4Q60641 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nr1h4Q60641 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.58■□□□□ 0.41
Nr1h4Q60641 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1h4Q60641 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Nr1h4Q60641 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1h4Q60641 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.58■□□□□ 0.4
Nr1h4Q60641 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1h4Q60641 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.58■□□□□ 0.4
Nr1h4Q60641 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1h4Q60641 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1h4Q60641 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1h4Q60641 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1h4Q60641 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Nr1h4Q60641 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1h4Q60641 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1h4Q60641 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1h4Q60641 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1h4Q60641 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1h4Q60641 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1h4Q60641 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1h4Q60641 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Nr1h4Q60641 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Nr1h4Q60641 Gm12251-201ENSMUST00000117893 792 ntBASIC17.57■□□□□ 0.4
Nr1h4Q60641 Gm11421-201ENSMUST00000122124 294 ntBASIC17.57■□□□□ 0.4
Nr1h4Q60641 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.57■□□□□ 0.4
Nr1h4Q60641 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1h4Q60641 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1h4Q60641 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1h4Q60641 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1h4Q60641 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.57■□□□□ 0.4
Nr1h4Q60641 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.57■□□□□ 0.4
Nr1h4Q60641 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1h4Q60641 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1h4Q60641 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.56■□□□□ 0.4
Nr1h4Q60641 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1h4Q60641 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1h4Q60641 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1h4Q60641 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1h4Q60641 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1h4Q60641 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.56■□□□□ 0.4
Nr1h4Q60641 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1h4Q60641 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1h4Q60641 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.56■□□□□ 0.4
Nr1h4Q60641 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Nr1h4Q60641 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1h4Q60641 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1h4Q60641 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.56■□□□□ 0.4
Nr1h4Q60641 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1h4Q60641 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Nr1h4Q60641 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1h4Q60641 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1h4Q60641 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1h4Q60641 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1h4Q60641 Smad6-203ENSMUST00000179458 273 ntBASIC17.55■□□□□ 0.4
Nr1h4Q60641 Gm27801-201ENSMUST00000184174 223 ntBASIC17.55■□□□□ 0.4
Nr1h4Q60641 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1h4Q60641 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1h4Q60641 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nr1h4Q60641 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.55■□□□□ 0.4
Nr1h4Q60641 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1h4Q60641 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1h4Q60641 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1h4Q60641 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1h4Q60641 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1h4Q60641 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1h4Q60641 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h4Q60641 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h4Q60641 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h4Q60641 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h4Q60641 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h4Q60641 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h4Q60641 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h4Q60641 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.54■□□□□ 0.4
Nr1h4Q60641 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nr1h4Q60641 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nr1h4Q60641 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h4Q60641 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1h4Q60641 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h4Q60641 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h4Q60641 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h4Q60641 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h4Q60641 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h4Q60641 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h4Q60641 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms