Protein–RNA interactions for Protein: Q5SSE9

Abca13, ATP-binding cassette sub-family A member 13, mousemouse

Predictions only

Length 5,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca13Q5SSE9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abca13Q5SSE9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Abca13Q5SSE9 Gm37035-201ENSMUST00000194809 2148 ntBASIC11.04□□□□□ -0.64
Abca13Q5SSE9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Abca13Q5SSE9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Abca13Q5SSE9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.04□□□□□ -0.64
Abca13Q5SSE9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Abca13Q5SSE9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Abca13Q5SSE9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Abca13Q5SSE9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Abca13Q5SSE9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Abca13Q5SSE9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Abca13Q5SSE9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.03□□□□□ -0.64
Abca13Q5SSE9 Gm11927-201ENSMUST00000118472 759 ntBASIC11.03□□□□□ -0.64
Abca13Q5SSE9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC11.03□□□□□ -0.64
Abca13Q5SSE9 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.03□□□□□ -0.64
Abca13Q5SSE9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Abca13Q5SSE9 Gm22697-201ENSMUST00000175194 63 ntBASIC11.03□□□□□ -0.64
Abca13Q5SSE9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Abca13Q5SSE9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Abca13Q5SSE9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC11.03□□□□□ -0.64
Abca13Q5SSE9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Abca13Q5SSE9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Abca13Q5SSE9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Abca13Q5SSE9 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.03□□□□□ -0.64
Abca13Q5SSE9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Abca13Q5SSE9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.02□□□□□ -0.64
Abca13Q5SSE9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC11.02□□□□□ -0.64
Abca13Q5SSE9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Abca13Q5SSE9 Gm27702-201ENSMUST00000184512 56 ntBASIC11.02□□□□□ -0.64
Abca13Q5SSE9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Abca13Q5SSE9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Abca13Q5SSE9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Abca13Q5SSE9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Abca13Q5SSE9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Abca13Q5SSE9 Gm10175-201ENSMUST00000086013 645 ntBASIC11.02□□□□□ -0.65
Abca13Q5SSE9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Abca13Q5SSE9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.02□□□□□ -0.65
Abca13Q5SSE9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Abca13Q5SSE9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Abca13Q5SSE9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.02□□□□□ -0.65
Abca13Q5SSE9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Abca13Q5SSE9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Abca13Q5SSE9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Abca13Q5SSE9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Abca13Q5SSE9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Abca13Q5SSE9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Abca13Q5SSE9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Abca13Q5SSE9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Abca13Q5SSE9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Abca13Q5SSE9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Abca13Q5SSE9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.01□□□□□ -0.65
Abca13Q5SSE9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.01□□□□□ -0.65
Abca13Q5SSE9 Gm38285-201ENSMUST00000192928 922 ntBASIC11.01□□□□□ -0.65
Abca13Q5SSE9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Abca13Q5SSE9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Abca13Q5SSE9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Abca13Q5SSE9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Abca13Q5SSE9 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.01□□□□□ -0.65
Abca13Q5SSE9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Abca13Q5SSE9 Gm20634-201ENSMUST00000090779 2956 ntBASIC11.01□□□□□ -0.65
Abca13Q5SSE9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Abca13Q5SSE9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Abca13Q5SSE9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Abca13Q5SSE9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Abca13Q5SSE9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Abca13Q5SSE9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Abca13Q5SSE9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11□□□□□ -0.65
Abca13Q5SSE9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11□□□□□ -0.65
Abca13Q5SSE9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11□□□□□ -0.65
Abca13Q5SSE9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Abca13Q5SSE9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Abca13Q5SSE9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11□□□□□ -0.65
Abca13Q5SSE9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC11□□□□□ -0.65
Abca13Q5SSE9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Abca13Q5SSE9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Abca13Q5SSE9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Abca13Q5SSE9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Abca13Q5SSE9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11□□□□□ -0.65
Abca13Q5SSE9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC11□□□□□ -0.65
Abca13Q5SSE9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Abca13Q5SSE9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Abca13Q5SSE9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Abca13Q5SSE9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11□□□□□ -0.65
Abca13Q5SSE9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11□□□□□ -0.65
Abca13Q5SSE9 Mir3081-201ENSMUST00000175305 84 ntBASIC11□□□□□ -0.65
Abca13Q5SSE9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Abca13Q5SSE9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC11□□□□□ -0.65
Abca13Q5SSE9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Abca13Q5SSE9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Abca13Q5SSE9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Abca13Q5SSE9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Abca13Q5SSE9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Abca13Q5SSE9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Abca13Q5SSE9 Gm25016-201ENSMUST00000158399 131 ntBASIC10.99□□□□□ -0.65
Abca13Q5SSE9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Abca13Q5SSE9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Abca13Q5SSE9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Abca13Q5SSE9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Abca13Q5SSE9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms