Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav2Q5R1I9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav2Q5R1I9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav2Q5R1I9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.71□□□□□ -0.05
Trav2Q5R1I9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav2Q5R1I9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav2Q5R1I9 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.71□□□□□ -0.05
Trav2Q5R1I9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav2Q5R1I9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav2Q5R1I9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav2Q5R1I9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav2Q5R1I9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav2Q5R1I9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav2Q5R1I9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav2Q5R1I9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav2Q5R1I9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav2Q5R1I9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav2Q5R1I9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav2Q5R1I9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav2Q5R1I9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav2Q5R1I9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav2Q5R1I9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav2Q5R1I9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav2Q5R1I9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav2Q5R1I9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav2Q5R1I9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav2Q5R1I9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav2Q5R1I9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav2Q5R1I9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav2Q5R1I9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Trav2Q5R1I9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav2Q5R1I9 Gm8520-201ENSMUST00000186517 868 ntBASIC14.7□□□□□ -0.06
Trav2Q5R1I9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav2Q5R1I9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav2Q5R1I9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav2Q5R1I9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Trav2Q5R1I9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav2Q5R1I9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav2Q5R1I9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav2Q5R1I9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav2Q5R1I9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav2Q5R1I9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav2Q5R1I9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav2Q5R1I9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav2Q5R1I9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Trav2Q5R1I9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav2Q5R1I9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav2Q5R1I9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav2Q5R1I9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav2Q5R1I9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav2Q5R1I9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav2Q5R1I9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Trav2Q5R1I9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav2Q5R1I9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav2Q5R1I9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav2Q5R1I9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav2Q5R1I9 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.69□□□□□ -0.06
Trav2Q5R1I9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav2Q5R1I9 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.69□□□□□ -0.06
Trav2Q5R1I9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav2Q5R1I9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav2Q5R1I9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav2Q5R1I9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav2Q5R1I9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav2Q5R1I9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav2Q5R1I9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav2Q5R1I9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav2Q5R1I9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav2Q5R1I9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav2Q5R1I9 Trmt13-210ENSMUST00000198454 880 ntBASIC14.68□□□□□ -0.06
Trav2Q5R1I9 Gm2559-201ENSMUST00000201323 363 ntBASIC14.68□□□□□ -0.06
Trav2Q5R1I9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav2Q5R1I9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav2Q5R1I9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Trav2Q5R1I9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav2Q5R1I9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav2Q5R1I9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav2Q5R1I9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav2Q5R1I9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trav2Q5R1I9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav2Q5R1I9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav2Q5R1I9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav2Q5R1I9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav2Q5R1I9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav2Q5R1I9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav2Q5R1I9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav2Q5R1I9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav2Q5R1I9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav2Q5R1I9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav2Q5R1I9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav2Q5R1I9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav2Q5R1I9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav2Q5R1I9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav2Q5R1I9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav2Q5R1I9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.67□□□□□ -0.06
Trav2Q5R1I9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav2Q5R1I9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav2Q5R1I9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav2Q5R1I9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav2Q5R1I9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms