Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-3Q5R1I1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav7d-3Q5R1I1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav7d-3Q5R1I1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-3Q5R1I1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav7d-3Q5R1I1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav7d-3Q5R1I1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-3Q5R1I1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-3Q5R1I1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-3Q5R1I1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-3Q5R1I1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-3Q5R1I1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-3Q5R1I1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-3Q5R1I1 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-3Q5R1I1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-3Q5R1I1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Gm6139-201ENSMUST00000079261 882 ntBASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Trav7d-3Q5R1I1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-3Q5R1I1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-3Q5R1I1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-3Q5R1I1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-3Q5R1I1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav7d-3Q5R1I1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trav7d-3Q5R1I1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-3Q5R1I1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.53□□□□□ -0.24
Trav7d-3Q5R1I1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Trav7d-3Q5R1I1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-3Q5R1I1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav7d-3Q5R1I1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav7d-3Q5R1I1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav7d-3Q5R1I1 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.53□□□□□ -0.24
Trav7d-3Q5R1I1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-3Q5R1I1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-3Q5R1I1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Trav7d-3Q5R1I1 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.53□□□□□ -0.24
Trav7d-3Q5R1I1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-3Q5R1I1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Trav7d-3Q5R1I1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav7d-3Q5R1I1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7d-3Q5R1I1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7d-3Q5R1I1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7d-3Q5R1I1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7d-3Q5R1I1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7d-3Q5R1I1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
Trav7d-3Q5R1I1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7d-3Q5R1I1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7d-3Q5R1I1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7d-3Q5R1I1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7d-3Q5R1I1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav7d-3Q5R1I1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7d-3Q5R1I1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav7d-3Q5R1I1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7d-3Q5R1I1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7d-3Q5R1I1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trav7d-3Q5R1I1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7d-3Q5R1I1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7d-3Q5R1I1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7d-3Q5R1I1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms