Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.36□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.35□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.34□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.33□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms