Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv2-2Q5R1A4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv2-2Q5R1A4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv2-2Q5R1A4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv2-2Q5R1A4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv2-2Q5R1A4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.14□□□□□ -0.15
Trdv2-2Q5R1A4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.14□□□□□ -0.15
Trdv2-2Q5R1A4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv2-2Q5R1A4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.14□□□□□ -0.15
Trdv2-2Q5R1A4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trdv2-2Q5R1A4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv2-2Q5R1A4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv2-2Q5R1A4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv2-2Q5R1A4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-2Q5R1A4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-2Q5R1A4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trdv2-2Q5R1A4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-2Q5R1A4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-2Q5R1A4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-2Q5R1A4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-2Q5R1A4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-2Q5R1A4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.12□□□□□ -0.15
Trdv2-2Q5R1A4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trdv2-2Q5R1A4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-2Q5R1A4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-2Q5R1A4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-2Q5R1A4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-2Q5R1A4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-2Q5R1A4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-2Q5R1A4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-2Q5R1A4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-2Q5R1A4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-2Q5R1A4 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.11□□□□□ -0.15
Trdv2-2Q5R1A4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdv2-2Q5R1A4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdv2-2Q5R1A4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.1□□□□□ -0.15
Trdv2-2Q5R1A4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdv2-2Q5R1A4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdv2-2Q5R1A4 Gm14117-201ENSMUST00000122417 843 ntBASIC14.1□□□□□ -0.15
Trdv2-2Q5R1A4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trdv2-2Q5R1A4 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.1□□□□□ -0.15
Trdv2-2Q5R1A4 Golgb1-201ENSMUST00000023534 498 ntBASIC14.1□□□□□ -0.15
Trdv2-2Q5R1A4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdv2-2Q5R1A4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdv2-2Q5R1A4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdv2-2Q5R1A4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
Trdv2-2Q5R1A4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdv2-2Q5R1A4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.1□□□□□ -0.15
Trdv2-2Q5R1A4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trdv2-2Q5R1A4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdv2-2Q5R1A4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdv2-2Q5R1A4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdv2-2Q5R1A4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.09□□□□□ -0.15
Trdv2-2Q5R1A4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms