Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf43Q5NCP0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.82■□□□□ 0.6
Rnf43Q5NCP0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf43Q5NCP0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rnf43Q5NCP0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rnf43Q5NCP0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf43Q5NCP0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf43Q5NCP0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf43Q5NCP0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf43Q5NCP0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Rnf43Q5NCP0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rnf43Q5NCP0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf43Q5NCP0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf43Q5NCP0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rnf43Q5NCP0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.81■□□□□ 0.6
Rnf43Q5NCP0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf43Q5NCP0 Mir5122-201ENSMUST00000175004 89 ntBASIC18.81■□□□□ 0.6
Rnf43Q5NCP0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf43Q5NCP0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf43Q5NCP0 Flg-201ENSMUST00000050758 1488 ntBASIC18.81■□□□□ 0.6
Rnf43Q5NCP0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rnf43Q5NCP0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf43Q5NCP0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf43Q5NCP0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf43Q5NCP0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf43Q5NCP0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Rnf43Q5NCP0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf43Q5NCP0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.8■□□□□ 0.6
Rnf43Q5NCP0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf43Q5NCP0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf43Q5NCP0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf43Q5NCP0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf43Q5NCP0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rnf43Q5NCP0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.8■□□□□ 0.6
Rnf43Q5NCP0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.8■□□□□ 0.6
Rnf43Q5NCP0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf43Q5NCP0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf43Q5NCP0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf43Q5NCP0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf43Q5NCP0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf43Q5NCP0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf43Q5NCP0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf43Q5NCP0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf43Q5NCP0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf43Q5NCP0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf43Q5NCP0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf43Q5NCP0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rnf43Q5NCP0 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.79■□□□□ 0.6
Rnf43Q5NCP0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf43Q5NCP0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf43Q5NCP0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf43Q5NCP0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf43Q5NCP0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf43Q5NCP0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf43Q5NCP0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.78■□□□□ 0.6
Rnf43Q5NCP0 Gm11927-201ENSMUST00000118472 759 ntBASIC18.78■□□□□ 0.6
Rnf43Q5NCP0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.78■□□□□ 0.6
Rnf43Q5NCP0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.78■□□□□ 0.6
Rnf43Q5NCP0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf43Q5NCP0 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.78■□□□□ 0.6
Rnf43Q5NCP0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf43Q5NCP0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.78■□□□□ 0.6
Rnf43Q5NCP0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf43Q5NCP0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf43Q5NCP0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rnf43Q5NCP0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf43Q5NCP0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf43Q5NCP0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf43Q5NCP0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf43Q5NCP0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rnf43Q5NCP0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf43Q5NCP0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf43Q5NCP0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.77■□□□□ 0.6
Rnf43Q5NCP0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf43Q5NCP0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf43Q5NCP0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf43Q5NCP0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf43Q5NCP0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf43Q5NCP0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
Rnf43Q5NCP0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf43Q5NCP0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rnf43Q5NCP0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf43Q5NCP0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf43Q5NCP0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rnf43Q5NCP0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf43Q5NCP0 Gm9987-201ENSMUST00000069768 567 ntBASIC18.76■□□□□ 0.59
Rnf43Q5NCP0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf43Q5NCP0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.76■□□□□ 0.59
Rnf43Q5NCP0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf43Q5NCP0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf43Q5NCP0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf43Q5NCP0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf43Q5NCP0 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.76■□□□□ 0.59
Rnf43Q5NCP0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf43Q5NCP0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf43Q5NCP0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rnf43Q5NCP0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf43Q5NCP0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf43Q5NCP0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf43Q5NCP0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms