Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clhc1Q5M6W3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clhc1Q5M6W3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clhc1Q5M6W3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clhc1Q5M6W3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Clhc1Q5M6W3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Clhc1Q5M6W3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Clhc1Q5M6W3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clhc1Q5M6W3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clhc1Q5M6W3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clhc1Q5M6W3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clhc1Q5M6W3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clhc1Q5M6W3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clhc1Q5M6W3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clhc1Q5M6W3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clhc1Q5M6W3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.78■□□□□ 0.44
Clhc1Q5M6W3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clhc1Q5M6W3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clhc1Q5M6W3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clhc1Q5M6W3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.78■□□□□ 0.44
Clhc1Q5M6W3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clhc1Q5M6W3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Clhc1Q5M6W3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clhc1Q5M6W3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Clhc1Q5M6W3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clhc1Q5M6W3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clhc1Q5M6W3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clhc1Q5M6W3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clhc1Q5M6W3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clhc1Q5M6W3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clhc1Q5M6W3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clhc1Q5M6W3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clhc1Q5M6W3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clhc1Q5M6W3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.77■□□□□ 0.44
Clhc1Q5M6W3 Mir7075-201ENSMUST00000184187 82 ntBASIC17.77■□□□□ 0.44
Clhc1Q5M6W3 Spcs1-204ENSMUST00000226782 949 ntBASIC17.77■□□□□ 0.44
Clhc1Q5M6W3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clhc1Q5M6W3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clhc1Q5M6W3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clhc1Q5M6W3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clhc1Q5M6W3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clhc1Q5M6W3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clhc1Q5M6W3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Clhc1Q5M6W3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Clhc1Q5M6W3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clhc1Q5M6W3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Clhc1Q5M6W3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clhc1Q5M6W3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clhc1Q5M6W3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Clhc1Q5M6W3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Clhc1Q5M6W3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clhc1Q5M6W3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clhc1Q5M6W3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Clhc1Q5M6W3 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.76■□□□□ 0.43
Clhc1Q5M6W3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clhc1Q5M6W3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clhc1Q5M6W3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clhc1Q5M6W3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clhc1Q5M6W3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clhc1Q5M6W3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clhc1Q5M6W3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clhc1Q5M6W3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.76■□□□□ 0.43
Clhc1Q5M6W3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clhc1Q5M6W3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clhc1Q5M6W3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clhc1Q5M6W3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 Gm45417-201ENSMUST00000209533 758 ntBASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Clhc1Q5M6W3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clhc1Q5M6W3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clhc1Q5M6W3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.74■□□□□ 0.43
Clhc1Q5M6W3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clhc1Q5M6W3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.74■□□□□ 0.43
Clhc1Q5M6W3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clhc1Q5M6W3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clhc1Q5M6W3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Clhc1Q5M6W3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clhc1Q5M6W3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.74■□□□□ 0.43
Clhc1Q5M6W3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 181.3 ms