Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rc3h1Q4VGL6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rc3h1Q4VGL6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rc3h1Q4VGL6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rc3h1Q4VGL6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rc3h1Q4VGL6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rc3h1Q4VGL6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rc3h1Q4VGL6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rc3h1Q4VGL6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rc3h1Q4VGL6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rc3h1Q4VGL6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rc3h1Q4VGL6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rc3h1Q4VGL6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rc3h1Q4VGL6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rc3h1Q4VGL6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rc3h1Q4VGL6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rc3h1Q4VGL6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Rc3h1Q4VGL6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Rc3h1Q4VGL6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rc3h1Q4VGL6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rc3h1Q4VGL6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.36■■□□□ 1.01
Rc3h1Q4VGL6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rc3h1Q4VGL6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rc3h1Q4VGL6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.36■■□□□ 1.01
Rc3h1Q4VGL6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rc3h1Q4VGL6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rc3h1Q4VGL6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rc3h1Q4VGL6 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.35■■□□□ 1.01
Rc3h1Q4VGL6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Rc3h1Q4VGL6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rc3h1Q4VGL6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rc3h1Q4VGL6 Gm10252-201ENSMUST00000209541 832 ntBASIC21.35■■□□□ 1.01
Rc3h1Q4VGL6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rc3h1Q4VGL6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rc3h1Q4VGL6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rc3h1Q4VGL6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rc3h1Q4VGL6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rc3h1Q4VGL6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.35■■□□□ 1.01
Rc3h1Q4VGL6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Rc3h1Q4VGL6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rc3h1Q4VGL6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rc3h1Q4VGL6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rc3h1Q4VGL6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rc3h1Q4VGL6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rc3h1Q4VGL6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Rc3h1Q4VGL6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rc3h1Q4VGL6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rc3h1Q4VGL6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rc3h1Q4VGL6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Rc3h1Q4VGL6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Rc3h1Q4VGL6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rc3h1Q4VGL6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Rc3h1Q4VGL6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rc3h1Q4VGL6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rc3h1Q4VGL6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rc3h1Q4VGL6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rc3h1Q4VGL6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rc3h1Q4VGL6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
Rc3h1Q4VGL6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rc3h1Q4VGL6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.33■■□□□ 1.01
Rc3h1Q4VGL6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.33■■□□□ 1.01
Rc3h1Q4VGL6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
Rc3h1Q4VGL6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rc3h1Q4VGL6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rc3h1Q4VGL6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Rc3h1Q4VGL6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.33■■□□□ 1
Rc3h1Q4VGL6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Rc3h1Q4VGL6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rc3h1Q4VGL6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rc3h1Q4VGL6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rc3h1Q4VGL6 Gm22325-201ENSMUST00000158904 308 ntBASIC21.32■■□□□ 1
Rc3h1Q4VGL6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rc3h1Q4VGL6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rc3h1Q4VGL6 Gm10812-201ENSMUST00000099864 546 ntBASIC21.32■■□□□ 1
Rc3h1Q4VGL6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rc3h1Q4VGL6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Rc3h1Q4VGL6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Rc3h1Q4VGL6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
Rc3h1Q4VGL6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rc3h1Q4VGL6 Gm11927-201ENSMUST00000118472 759 ntBASIC21.31■■□□□ 1
Rc3h1Q4VGL6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rc3h1Q4VGL6 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.31■■□□□ 1
Rc3h1Q4VGL6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.31■■□□□ 1
Rc3h1Q4VGL6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rc3h1Q4VGL6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rc3h1Q4VGL6 BC021767-201ENSMUST00000126387 1716 ntBASIC21.31■■□□□ 1
Rc3h1Q4VGL6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rc3h1Q4VGL6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rc3h1Q4VGL6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rc3h1Q4VGL6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rc3h1Q4VGL6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Rc3h1Q4VGL6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rc3h1Q4VGL6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rc3h1Q4VGL6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rc3h1Q4VGL6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rc3h1Q4VGL6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rc3h1Q4VGL6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rc3h1Q4VGL6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.3■■□□□ 1
Rc3h1Q4VGL6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Rc3h1Q4VGL6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms