Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Pds5bQ4VA53 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Pds5bQ4VA53 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Pds5bQ4VA53 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Pds5bQ4VA53 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC32.61■■■□□ 2.81
Pds5bQ4VA53 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Pds5bQ4VA53 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Pds5bQ4VA53 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Pds5bQ4VA53 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Pds5bQ4VA53 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Pds5bQ4VA53 Gm29518-201ENSMUST00000190858 372 ntBASIC32.6■■■□□ 2.81
Pds5bQ4VA53 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Pds5bQ4VA53 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Pds5bQ4VA53 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC32.59■■■□□ 2.81
Pds5bQ4VA53 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC32.58■■■□□ 2.81
Pds5bQ4VA53 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC32.58■■■□□ 2.81
Pds5bQ4VA53 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC32.58■■■□□ 2.81
Pds5bQ4VA53 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Pds5bQ4VA53 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
Pds5bQ4VA53 AC152827.1-201ENSMUST00000221143 2189 ntBASIC32.57■■■□□ 2.8
Pds5bQ4VA53 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC32.57■■■□□ 2.8
Pds5bQ4VA53 Gm4217-201ENSMUST00000182243 1002 ntBASIC32.57■■■□□ 2.8
Pds5bQ4VA53 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC32.57■■■□□ 2.8
Pds5bQ4VA53 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Pds5bQ4VA53 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Pds5bQ4VA53 Gm9013-201ENSMUST00000132939 882 ntBASIC32.56■■■□□ 2.8
Pds5bQ4VA53 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC32.56■■■□□ 2.8
Pds5bQ4VA53 Gm27357-201ENSMUST00000183754 135 ntBASIC32.56■■■□□ 2.8
Pds5bQ4VA53 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Pds5bQ4VA53 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC32.56■■■□□ 2.8
Pds5bQ4VA53 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Pds5bQ4VA53 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC32.55■■■□□ 2.8
Pds5bQ4VA53 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Pds5bQ4VA53 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC32.55■■■□□ 2.8
Pds5bQ4VA53 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Pds5bQ4VA53 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC32.54■■■□□ 2.8
Pds5bQ4VA53 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
Pds5bQ4VA53 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC32.54■■■□□ 2.8
Pds5bQ4VA53 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Pds5bQ4VA53 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC32.54■■■□□ 2.8
Pds5bQ4VA53 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC32.54■■■□□ 2.8
Pds5bQ4VA53 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Pds5bQ4VA53 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC32.53■■■□□ 2.8
Pds5bQ4VA53 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Pds5bQ4VA53 Gm18958-201ENSMUST00000174258 762 ntBASIC32.53■■■□□ 2.8
Pds5bQ4VA53 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Pds5bQ4VA53 Mzt1-203ENSMUST00000227948 952 ntBASIC32.53■■■□□ 2.8
Pds5bQ4VA53 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Pds5bQ4VA53 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Pds5bQ4VA53 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
Pds5bQ4VA53 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Pds5bQ4VA53 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Pds5bQ4VA53 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Pds5bQ4VA53 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Pds5bQ4VA53 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Pds5bQ4VA53 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
Pds5bQ4VA53 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC32.52■■■□□ 2.8
Pds5bQ4VA53 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
Pds5bQ4VA53 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
Pds5bQ4VA53 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
Pds5bQ4VA53 Mir2861-201ENSMUST00000175539 82 ntBASIC32.51■■■□□ 2.8
Pds5bQ4VA53 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Pds5bQ4VA53 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Pds5bQ4VA53 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC32.51■■■□□ 2.8
Pds5bQ4VA53 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.51■■■□□ 2.8
Pds5bQ4VA53 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Pds5bQ4VA53 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.79
Pds5bQ4VA53 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
Pds5bQ4VA53 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Pds5bQ4VA53 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Pds5bQ4VA53 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.79
Pds5bQ4VA53 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC32.51■■■□□ 2.79
Pds5bQ4VA53 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
Pds5bQ4VA53 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC32.5■■■□□ 2.79
Pds5bQ4VA53 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Pds5bQ4VA53 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Pds5bQ4VA53 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
Pds5bQ4VA53 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC32.5■■■□□ 2.79
Pds5bQ4VA53 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Pds5bQ4VA53 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Pds5bQ4VA53 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Pds5bQ4VA53 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Pds5bQ4VA53 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC32.49■■■□□ 2.79
Pds5bQ4VA53 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC32.49■■■□□ 2.79
Pds5bQ4VA53 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Pds5bQ4VA53 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Pds5bQ4VA53 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Pds5bQ4VA53 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Pds5bQ4VA53 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC32.48■■■□□ 2.79
Pds5bQ4VA53 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Pds5bQ4VA53 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Pds5bQ4VA53 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Pds5bQ4VA53 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC32.48■■■□□ 2.79
Pds5bQ4VA53 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC32.48■■■□□ 2.79
Pds5bQ4VA53 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Pds5bQ4VA53 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Pds5bQ4VA53 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Pds5bQ4VA53 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
Pds5bQ4VA53 Gm17808-201ENSMUST00000200859 894 ntBASIC32.47■■■□□ 2.79
Pds5bQ4VA53 Gm21559-201ENSMUST00000220638 855 ntBASIC32.47■■■□□ 2.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms