Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Syne3Q4FZC9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Syne3Q4FZC9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Syne3Q4FZC9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Syne3Q4FZC9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Syne3Q4FZC9 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.57■□□□□ 0.72
Syne3Q4FZC9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Syne3Q4FZC9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Syne3Q4FZC9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Syne3Q4FZC9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Syne3Q4FZC9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.57■□□□□ 0.72
Syne3Q4FZC9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Syne3Q4FZC9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Syne3Q4FZC9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.57■□□□□ 0.72
Syne3Q4FZC9 Gm7514-201ENSMUST00000209475 934 ntBASIC19.57■□□□□ 0.72
Syne3Q4FZC9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Syne3Q4FZC9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Syne3Q4FZC9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Syne3Q4FZC9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Syne3Q4FZC9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Syne3Q4FZC9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Syne3Q4FZC9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Syne3Q4FZC9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Syne3Q4FZC9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Syne3Q4FZC9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Syne3Q4FZC9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.56■□□□□ 0.72
Syne3Q4FZC9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Syne3Q4FZC9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Syne3Q4FZC9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.56■□□□□ 0.72
Syne3Q4FZC9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Syne3Q4FZC9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Syne3Q4FZC9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.56■□□□□ 0.72
Syne3Q4FZC9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.56■□□□□ 0.72
Syne3Q4FZC9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Syne3Q4FZC9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Syne3Q4FZC9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Syne3Q4FZC9 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.56■□□□□ 0.72
Syne3Q4FZC9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Syne3Q4FZC9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Syne3Q4FZC9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Syne3Q4FZC9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Syne3Q4FZC9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Syne3Q4FZC9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Syne3Q4FZC9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Syne3Q4FZC9 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.55■□□□□ 0.72
Syne3Q4FZC9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Syne3Q4FZC9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Syne3Q4FZC9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Syne3Q4FZC9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Syne3Q4FZC9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Syne3Q4FZC9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Syne3Q4FZC9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Syne3Q4FZC9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.54■□□□□ 0.72
Syne3Q4FZC9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Syne3Q4FZC9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Syne3Q4FZC9 Gm10849-201ENSMUST00000100397 618 ntBASIC19.54■□□□□ 0.72
Syne3Q4FZC9 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.54■□□□□ 0.72
Syne3Q4FZC9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.54■□□□□ 0.72
Syne3Q4FZC9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Syne3Q4FZC9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Syne3Q4FZC9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Syne3Q4FZC9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Syne3Q4FZC9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Syne3Q4FZC9 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.53■□□□□ 0.72
Syne3Q4FZC9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Syne3Q4FZC9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Syne3Q4FZC9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Syne3Q4FZC9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Syne3Q4FZC9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.53■□□□□ 0.72
Syne3Q4FZC9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.53■□□□□ 0.72
Syne3Q4FZC9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Syne3Q4FZC9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Syne3Q4FZC9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Syne3Q4FZC9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Syne3Q4FZC9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Syne3Q4FZC9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Syne3Q4FZC9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syne3Q4FZC9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.52■□□□□ 0.72
Syne3Q4FZC9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syne3Q4FZC9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Syne3Q4FZC9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syne3Q4FZC9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syne3Q4FZC9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Syne3Q4FZC9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syne3Q4FZC9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Syne3Q4FZC9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syne3Q4FZC9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syne3Q4FZC9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.72
Syne3Q4FZC9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.52■□□□□ 0.72
Syne3Q4FZC9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Syne3Q4FZC9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Syne3Q4FZC9 Gm27405-201ENSMUST00000184201 112 ntBASIC19.52■□□□□ 0.72
Syne3Q4FZC9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syne3Q4FZC9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syne3Q4FZC9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syne3Q4FZC9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syne3Q4FZC9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Syne3Q4FZC9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Syne3Q4FZC9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syne3Q4FZC9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms