Protein–RNA interactions for Protein: Q3V2L0

Defb28, Beta-defensin, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb28Q3V2L0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Defb28Q3V2L0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Defb28Q3V2L0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Defb28Q3V2L0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Defb28Q3V2L0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Defb28Q3V2L0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Defb28Q3V2L0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Defb28Q3V2L0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Defb28Q3V2L0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.83■□□□□ 0.45
Defb28Q3V2L0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Defb28Q3V2L0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Defb28Q3V2L0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Defb28Q3V2L0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Defb28Q3V2L0 Gm6345-202ENSMUST00000180900 204 ntBASIC17.83■□□□□ 0.44
Defb28Q3V2L0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Defb28Q3V2L0 Gm33142-201ENSMUST00000193913 867 ntBASIC17.83■□□□□ 0.44
Defb28Q3V2L0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Defb28Q3V2L0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Defb28Q3V2L0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Defb28Q3V2L0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Defb28Q3V2L0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Defb28Q3V2L0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Defb28Q3V2L0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
Defb28Q3V2L0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Defb28Q3V2L0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Defb28Q3V2L0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Defb28Q3V2L0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Defb28Q3V2L0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.82■□□□□ 0.44
Defb28Q3V2L0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Defb28Q3V2L0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.82■□□□□ 0.44
Defb28Q3V2L0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Defb28Q3V2L0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Defb28Q3V2L0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.82■□□□□ 0.44
Defb28Q3V2L0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Defb28Q3V2L0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Defb28Q3V2L0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Defb28Q3V2L0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Defb28Q3V2L0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Defb28Q3V2L0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Defb28Q3V2L0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Defb28Q3V2L0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.81■□□□□ 0.44
Defb28Q3V2L0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.81■□□□□ 0.44
Defb28Q3V2L0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Defb28Q3V2L0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Defb28Q3V2L0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Defb28Q3V2L0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Defb28Q3V2L0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Defb28Q3V2L0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Defb28Q3V2L0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Defb28Q3V2L0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Defb28Q3V2L0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Defb28Q3V2L0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Defb28Q3V2L0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Defb28Q3V2L0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
Defb28Q3V2L0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Defb28Q3V2L0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Defb28Q3V2L0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Defb28Q3V2L0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.8■□□□□ 0.44
Defb28Q3V2L0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Defb28Q3V2L0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Defb28Q3V2L0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Defb28Q3V2L0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Defb28Q3V2L0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Defb28Q3V2L0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Defb28Q3V2L0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Defb28Q3V2L0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Defb28Q3V2L0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.79■□□□□ 0.44
Defb28Q3V2L0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Defb28Q3V2L0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.79■□□□□ 0.44
Defb28Q3V2L0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.79■□□□□ 0.44
Defb28Q3V2L0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Defb28Q3V2L0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Defb28Q3V2L0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Defb28Q3V2L0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Defb28Q3V2L0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Defb28Q3V2L0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Defb28Q3V2L0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Defb28Q3V2L0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Defb28Q3V2L0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Defb28Q3V2L0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Defb28Q3V2L0 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.78■□□□□ 0.44
Defb28Q3V2L0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Defb28Q3V2L0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Defb28Q3V2L0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Defb28Q3V2L0 Gm14859-201ENSMUST00000117752 357 ntBASIC17.78■□□□□ 0.44
Defb28Q3V2L0 Gm9103-201ENSMUST00000119371 405 ntBASIC17.78■□□□□ 0.44
Defb28Q3V2L0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Defb28Q3V2L0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.78■□□□□ 0.44
Defb28Q3V2L0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.78■□□□□ 0.44
Defb28Q3V2L0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Defb28Q3V2L0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Defb28Q3V2L0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Defb28Q3V2L0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Defb28Q3V2L0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Defb28Q3V2L0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Defb28Q3V2L0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Defb28Q3V2L0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Defb28Q3V2L0 Gm18032-201ENSMUST00000222541 538 ntBASIC17.77■□□□□ 0.44
Defb28Q3V2L0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.77■□□□□ 0.44
Defb28Q3V2L0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms