Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam196aQ3USH1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam196aQ3USH1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam196aQ3USH1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam196aQ3USH1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam196aQ3USH1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam196aQ3USH1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Fam196aQ3USH1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Fam196aQ3USH1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam196aQ3USH1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam196aQ3USH1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam196aQ3USH1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Fam196aQ3USH1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam196aQ3USH1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam196aQ3USH1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam196aQ3USH1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Fam196aQ3USH1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam196aQ3USH1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam196aQ3USH1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam196aQ3USH1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam196aQ3USH1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Fam196aQ3USH1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam196aQ3USH1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Fam196aQ3USH1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam196aQ3USH1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam196aQ3USH1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam196aQ3USH1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Fam196aQ3USH1 Gm7284-201ENSMUST00000131667 944 ntBASIC18.59■□□□□ 0.57
Fam196aQ3USH1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam196aQ3USH1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Fam196aQ3USH1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam196aQ3USH1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam196aQ3USH1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Fam196aQ3USH1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam196aQ3USH1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Fam196aQ3USH1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Fam196aQ3USH1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.58■□□□□ 0.56
Fam196aQ3USH1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Fam196aQ3USH1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Fam196aQ3USH1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Fam196aQ3USH1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam196aQ3USH1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam196aQ3USH1 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.57■□□□□ 0.56
Fam196aQ3USH1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Fam196aQ3USH1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.57■□□□□ 0.56
Fam196aQ3USH1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Fam196aQ3USH1 Mir5130-201ENSMUST00000175160 84 ntBASIC18.57■□□□□ 0.56
Fam196aQ3USH1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.57■□□□□ 0.56
Fam196aQ3USH1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam196aQ3USH1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam196aQ3USH1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam196aQ3USH1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Fam196aQ3USH1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam196aQ3USH1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Fam196aQ3USH1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Fam196aQ3USH1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Fam196aQ3USH1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam196aQ3USH1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.56■□□□□ 0.56
Fam196aQ3USH1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam196aQ3USH1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam196aQ3USH1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
Fam196aQ3USH1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam196aQ3USH1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Fam196aQ3USH1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam196aQ3USH1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam196aQ3USH1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Fam196aQ3USH1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Fam196aQ3USH1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.55■□□□□ 0.56
Fam196aQ3USH1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.55■□□□□ 0.56
Fam196aQ3USH1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Fam196aQ3USH1 Gm25016-201ENSMUST00000158399 131 ntBASIC18.55■□□□□ 0.56
Fam196aQ3USH1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Fam196aQ3USH1 Gm27463-201ENSMUST00000183569 57 ntBASIC18.55■□□□□ 0.56
Fam196aQ3USH1 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.55■□□□□ 0.56
Fam196aQ3USH1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Fam196aQ3USH1 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.55■□□□□ 0.56
Fam196aQ3USH1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Fam196aQ3USH1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Fam196aQ3USH1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Fam196aQ3USH1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fam196aQ3USH1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fam196aQ3USH1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.54■□□□□ 0.56
Fam196aQ3USH1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fam196aQ3USH1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fam196aQ3USH1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.54■□□□□ 0.56
Fam196aQ3USH1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fam196aQ3USH1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Fam196aQ3USH1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fam196aQ3USH1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fam196aQ3USH1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms