Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Gm10698-201ENSMUST00000182663 604 ntBASIC18.57■□□□□ 0.56
Usp30Q3UN04 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.57■□□□□ 0.56
Usp30Q3UN04 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp30Q3UN04 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Usp30Q3UN04 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp30Q3UN04 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp30Q3UN04 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp30Q3UN04 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Usp30Q3UN04 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp30Q3UN04 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp30Q3UN04 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp30Q3UN04 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp30Q3UN04 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.56■□□□□ 0.56
Usp30Q3UN04 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.56■□□□□ 0.56
Usp30Q3UN04 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.56■□□□□ 0.56
Usp30Q3UN04 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp30Q3UN04 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.56■□□□□ 0.56
Usp30Q3UN04 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Usp30Q3UN04 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp30Q3UN04 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.55■□□□□ 0.56
Usp30Q3UN04 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp30Q3UN04 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp30Q3UN04 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp30Q3UN04 Gm11927-201ENSMUST00000118472 759 ntBASIC18.55■□□□□ 0.56
Usp30Q3UN04 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.55■□□□□ 0.56
Usp30Q3UN04 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp30Q3UN04 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Usp30Q3UN04 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp30Q3UN04 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Usp30Q3UN04 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Usp30Q3UN04 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp30Q3UN04 Mir6982-201ENSMUST00000184354 68 ntBASIC18.54■□□□□ 0.56
Usp30Q3UN04 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.54■□□□□ 0.56
Usp30Q3UN04 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp30Q3UN04 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Usp30Q3UN04 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp30Q3UN04 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.54■□□□□ 0.56
Usp30Q3UN04 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp30Q3UN04 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Usp30Q3UN04 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Usp30Q3UN04 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.53■□□□□ 0.56
Usp30Q3UN04 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Usp30Q3UN04 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp30Q3UN04 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp30Q3UN04 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp30Q3UN04 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp30Q3UN04 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp30Q3UN04 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Usp30Q3UN04 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp30Q3UN04 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp30Q3UN04 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp30Q3UN04 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Usp30Q3UN04 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp30Q3UN04 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.52■□□□□ 0.56
Usp30Q3UN04 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.52■□□□□ 0.56
Usp30Q3UN04 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp30Q3UN04 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Usp30Q3UN04 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Usp30Q3UN04 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Usp30Q3UN04 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp30Q3UN04 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp30Q3UN04 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Usp30Q3UN04 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.51■□□□□ 0.55
Usp30Q3UN04 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp30Q3UN04 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp30Q3UN04 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp30Q3UN04 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp30Q3UN04 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Usp30Q3UN04 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Usp30Q3UN04 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Usp30Q3UN04 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp30Q3UN04 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp30Q3UN04 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp30Q3UN04 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp30Q3UN04 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp30Q3UN04 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp30Q3UN04 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp30Q3UN04 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp30Q3UN04 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp30Q3UN04 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp30Q3UN04 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp30Q3UN04 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Usp30Q3UN04 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Usp30Q3UN04 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Usp30Q3UN04 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Usp30Q3UN04 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp30Q3UN04 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp30Q3UN04 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.49■□□□□ 0.55
Usp30Q3UN04 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.49■□□□□ 0.55
Usp30Q3UN04 Mir7071-201ENSMUST00000184847 69 ntBASIC18.49■□□□□ 0.55
Usp30Q3UN04 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.49■□□□□ 0.55
Usp30Q3UN04 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Usp30Q3UN04 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp30Q3UN04 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp30Q3UN04 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp30Q3UN04 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Usp30Q3UN04 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp30Q3UN04 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Usp30Q3UN04 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp30Q3UN04 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms