Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf44Q3UHJ8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf44Q3UHJ8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf44Q3UHJ8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf44Q3UHJ8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf44Q3UHJ8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf44Q3UHJ8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf44Q3UHJ8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Rnf44Q3UHJ8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf44Q3UHJ8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rnf44Q3UHJ8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.84■□□□□ 0.45
Rnf44Q3UHJ8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf44Q3UHJ8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf44Q3UHJ8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Rnf44Q3UHJ8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.84■□□□□ 0.45
Rnf44Q3UHJ8 Gm13148-201ENSMUST00000118892 745 ntBASIC17.84■□□□□ 0.45
Rnf44Q3UHJ8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf44Q3UHJ8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf44Q3UHJ8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf44Q3UHJ8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf44Q3UHJ8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf44Q3UHJ8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf44Q3UHJ8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf44Q3UHJ8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.83■□□□□ 0.45
Rnf44Q3UHJ8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Rnf44Q3UHJ8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf44Q3UHJ8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf44Q3UHJ8 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.83■□□□□ 0.45
Rnf44Q3UHJ8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf44Q3UHJ8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf44Q3UHJ8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf44Q3UHJ8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf44Q3UHJ8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.83■□□□□ 0.44
Rnf44Q3UHJ8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Rnf44Q3UHJ8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf44Q3UHJ8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf44Q3UHJ8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.82■□□□□ 0.44
Rnf44Q3UHJ8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.81■□□□□ 0.44
Rnf44Q3UHJ8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf44Q3UHJ8 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.81■□□□□ 0.44
Rnf44Q3UHJ8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf44Q3UHJ8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf44Q3UHJ8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf44Q3UHJ8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf44Q3UHJ8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf44Q3UHJ8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf44Q3UHJ8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf44Q3UHJ8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.81■□□□□ 0.44
Rnf44Q3UHJ8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf44Q3UHJ8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf44Q3UHJ8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf44Q3UHJ8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf44Q3UHJ8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Rnf44Q3UHJ8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf44Q3UHJ8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 Gm10602-201ENSMUST00000098239 609 ntBASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms