Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Snx27Q3UHD6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Snx27Q3UHD6 Iqck-206ENSMUST00000208658 2891 ntBASIC19.99■□□□□ 0.79
Snx27Q3UHD6 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.99■□□□□ 0.79
Snx27Q3UHD6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Snx27Q3UHD6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Snx27Q3UHD6 Gm11927-201ENSMUST00000118472 759 ntBASIC19.99■□□□□ 0.79
Snx27Q3UHD6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Snx27Q3UHD6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Snx27Q3UHD6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Snx27Q3UHD6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Snx27Q3UHD6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Snx27Q3UHD6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Snx27Q3UHD6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Snx27Q3UHD6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.98■□□□□ 0.79
Snx27Q3UHD6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Snx27Q3UHD6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Snx27Q3UHD6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.98■□□□□ 0.79
Snx27Q3UHD6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Snx27Q3UHD6 Gm10252-201ENSMUST00000209541 832 ntBASIC19.98■□□□□ 0.79
Snx27Q3UHD6 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.98■□□□□ 0.79
Snx27Q3UHD6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Snx27Q3UHD6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Snx27Q3UHD6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Snx27Q3UHD6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Snx27Q3UHD6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Snx27Q3UHD6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Snx27Q3UHD6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Snx27Q3UHD6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Snx27Q3UHD6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Snx27Q3UHD6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.97■□□□□ 0.79
Snx27Q3UHD6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Snx27Q3UHD6 Gm13158-201ENSMUST00000122007 736 ntBASIC19.97■□□□□ 0.79
Snx27Q3UHD6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Snx27Q3UHD6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Snx27Q3UHD6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Snx27Q3UHD6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Snx27Q3UHD6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Snx27Q3UHD6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Snx27Q3UHD6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Snx27Q3UHD6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Snx27Q3UHD6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Snx27Q3UHD6 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.96■□□□□ 0.79
Snx27Q3UHD6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Snx27Q3UHD6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.96■□□□□ 0.79
Snx27Q3UHD6 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.96■□□□□ 0.79
Snx27Q3UHD6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Snx27Q3UHD6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Snx27Q3UHD6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.96■□□□□ 0.79
Snx27Q3UHD6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Snx27Q3UHD6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Snx27Q3UHD6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Snx27Q3UHD6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Snx27Q3UHD6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Snx27Q3UHD6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Snx27Q3UHD6 Gm10698-201ENSMUST00000182663 604 ntBASIC19.95■□□□□ 0.78
Snx27Q3UHD6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Snx27Q3UHD6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Snx27Q3UHD6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.95■□□□□ 0.78
Snx27Q3UHD6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Snx27Q3UHD6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.95■□□□□ 0.78
Snx27Q3UHD6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Snx27Q3UHD6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Snx27Q3UHD6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Snx27Q3UHD6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Snx27Q3UHD6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Snx27Q3UHD6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Snx27Q3UHD6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.94■□□□□ 0.78
Snx27Q3UHD6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Snx27Q3UHD6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Snx27Q3UHD6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Snx27Q3UHD6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.94■□□□□ 0.78
Snx27Q3UHD6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Snx27Q3UHD6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Snx27Q3UHD6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Snx27Q3UHD6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Snx27Q3UHD6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.93■□□□□ 0.78
Snx27Q3UHD6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.93■□□□□ 0.78
Snx27Q3UHD6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Snx27Q3UHD6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.93■□□□□ 0.78
Snx27Q3UHD6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.93■□□□□ 0.78
Snx27Q3UHD6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Snx27Q3UHD6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Snx27Q3UHD6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Snx27Q3UHD6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Snx27Q3UHD6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Snx27Q3UHD6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.93■□□□□ 0.78
Snx27Q3UHD6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Snx27Q3UHD6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Snx27Q3UHD6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Snx27Q3UHD6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Snx27Q3UHD6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Snx27Q3UHD6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Snx27Q3UHD6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Snx27Q3UHD6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Snx27Q3UHD6 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.92■□□□□ 0.78
Snx27Q3UHD6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.92■□□□□ 0.78
Snx27Q3UHD6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Snx27Q3UHD6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Snx27Q3UHD6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms