Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rapgef1Q3UHC1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Rapgef1Q3UHC1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rapgef1Q3UHC1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rapgef1Q3UHC1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rapgef1Q3UHC1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rapgef1Q3UHC1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rapgef1Q3UHC1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.16■□□□□ 0.82
Rapgef1Q3UHC1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rapgef1Q3UHC1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rapgef1Q3UHC1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rapgef1Q3UHC1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rapgef1Q3UHC1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.15■□□□□ 0.82
Rapgef1Q3UHC1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rapgef1Q3UHC1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rapgef1Q3UHC1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rapgef1Q3UHC1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Rapgef1Q3UHC1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rapgef1Q3UHC1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rapgef1Q3UHC1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rapgef1Q3UHC1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.15■□□□□ 0.82
Rapgef1Q3UHC1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rapgef1Q3UHC1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Rapgef1Q3UHC1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rapgef1Q3UHC1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rapgef1Q3UHC1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rapgef1Q3UHC1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rapgef1Q3UHC1 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.15■□□□□ 0.82
Rapgef1Q3UHC1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rapgef1Q3UHC1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rapgef1Q3UHC1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Rapgef1Q3UHC1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rapgef1Q3UHC1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rapgef1Q3UHC1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rapgef1Q3UHC1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rapgef1Q3UHC1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.14■□□□□ 0.81
Rapgef1Q3UHC1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rapgef1Q3UHC1 Gm10602-201ENSMUST00000098239 609 ntBASIC20.14■□□□□ 0.81
Rapgef1Q3UHC1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rapgef1Q3UHC1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rapgef1Q3UHC1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rapgef1Q3UHC1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rapgef1Q3UHC1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rapgef1Q3UHC1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rapgef1Q3UHC1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rapgef1Q3UHC1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Rapgef1Q3UHC1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rapgef1Q3UHC1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rapgef1Q3UHC1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rapgef1Q3UHC1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rapgef1Q3UHC1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Rapgef1Q3UHC1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Rapgef1Q3UHC1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rapgef1Q3UHC1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.13■□□□□ 0.81
Rapgef1Q3UHC1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.13■□□□□ 0.81
Rapgef1Q3UHC1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rapgef1Q3UHC1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rapgef1Q3UHC1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rapgef1Q3UHC1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rapgef1Q3UHC1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rapgef1Q3UHC1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rapgef1Q3UHC1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rapgef1Q3UHC1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rapgef1Q3UHC1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rapgef1Q3UHC1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rapgef1Q3UHC1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.12■□□□□ 0.81
Rapgef1Q3UHC1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rapgef1Q3UHC1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.12■□□□□ 0.81
Rapgef1Q3UHC1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rapgef1Q3UHC1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rapgef1Q3UHC1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rapgef1Q3UHC1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rapgef1Q3UHC1 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.11■□□□□ 0.81
Rapgef1Q3UHC1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.11■□□□□ 0.81
Rapgef1Q3UHC1 Gm7514-201ENSMUST00000209475 934 ntBASIC20.11■□□□□ 0.81
Rapgef1Q3UHC1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.11■□□□□ 0.81
Rapgef1Q3UHC1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rapgef1Q3UHC1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rapgef1Q3UHC1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Rapgef1Q3UHC1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rapgef1Q3UHC1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rapgef1Q3UHC1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rapgef1Q3UHC1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rapgef1Q3UHC1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rapgef1Q3UHC1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rapgef1Q3UHC1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rapgef1Q3UHC1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.1■□□□□ 0.81
Rapgef1Q3UHC1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rapgef1Q3UHC1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rapgef1Q3UHC1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rapgef1Q3UHC1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rapgef1Q3UHC1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Rapgef1Q3UHC1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rapgef1Q3UHC1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Rapgef1Q3UHC1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Rapgef1Q3UHC1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rapgef1Q3UHC1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rapgef1Q3UHC1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rapgef1Q3UHC1 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.09■□□□□ 0.81
Rapgef1Q3UHC1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms