Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nhej1Q3KNJ2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nhej1Q3KNJ2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.68■□□□□ 0.74
Nhej1Q3KNJ2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Nhej1Q3KNJ2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nhej1Q3KNJ2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Nhej1Q3KNJ2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.68■□□□□ 0.74
Nhej1Q3KNJ2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nhej1Q3KNJ2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nhej1Q3KNJ2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nhej1Q3KNJ2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nhej1Q3KNJ2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nhej1Q3KNJ2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nhej1Q3KNJ2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nhej1Q3KNJ2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhej1Q3KNJ2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhej1Q3KNJ2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhej1Q3KNJ2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhej1Q3KNJ2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhej1Q3KNJ2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhej1Q3KNJ2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Nhej1Q3KNJ2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nhej1Q3KNJ2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nhej1Q3KNJ2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhej1Q3KNJ2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhej1Q3KNJ2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhej1Q3KNJ2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhej1Q3KNJ2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nhej1Q3KNJ2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhej1Q3KNJ2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhej1Q3KNJ2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhej1Q3KNJ2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhej1Q3KNJ2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nhej1Q3KNJ2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.67■□□□□ 0.74
Nhej1Q3KNJ2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nhej1Q3KNJ2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nhej1Q3KNJ2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nhej1Q3KNJ2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nhej1Q3KNJ2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nhej1Q3KNJ2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
Nhej1Q3KNJ2 Gm26833-201ENSMUST00000180899 440 ntBASIC19.66■□□□□ 0.74
Nhej1Q3KNJ2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nhej1Q3KNJ2 Gm6139-201ENSMUST00000079261 882 ntBASIC19.66■□□□□ 0.74
Nhej1Q3KNJ2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nhej1Q3KNJ2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nhej1Q3KNJ2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
Nhej1Q3KNJ2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nhej1Q3KNJ2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.66■□□□□ 0.74
Nhej1Q3KNJ2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nhej1Q3KNJ2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nhej1Q3KNJ2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nhej1Q3KNJ2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Nhej1Q3KNJ2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nhej1Q3KNJ2 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.65■□□□□ 0.74
Nhej1Q3KNJ2 Gm38205-201ENSMUST00000192243 258 ntBASIC19.65■□□□□ 0.74
Nhej1Q3KNJ2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nhej1Q3KNJ2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nhej1Q3KNJ2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nhej1Q3KNJ2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nhej1Q3KNJ2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nhej1Q3KNJ2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Nhej1Q3KNJ2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nhej1Q3KNJ2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nhej1Q3KNJ2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nhej1Q3KNJ2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nhej1Q3KNJ2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Nhej1Q3KNJ2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nhej1Q3KNJ2 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.64■□□□□ 0.73
Nhej1Q3KNJ2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nhej1Q3KNJ2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.64■□□□□ 0.73
Nhej1Q3KNJ2 Gm27454-201ENSMUST00000185090 204 ntBASIC19.64■□□□□ 0.73
Nhej1Q3KNJ2 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.64■□□□□ 0.73
Nhej1Q3KNJ2 Gm40848-201ENSMUST00000221998 324 ntBASIC19.64■□□□□ 0.73
Nhej1Q3KNJ2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.64■□□□□ 0.73
Nhej1Q3KNJ2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nhej1Q3KNJ2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nhej1Q3KNJ2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nhej1Q3KNJ2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Nhej1Q3KNJ2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nhej1Q3KNJ2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.63■□□□□ 0.73
Nhej1Q3KNJ2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Nhej1Q3KNJ2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nhej1Q3KNJ2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.63■□□□□ 0.73
Nhej1Q3KNJ2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nhej1Q3KNJ2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nhej1Q3KNJ2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nhej1Q3KNJ2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nhej1Q3KNJ2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.63■□□□□ 0.73
Nhej1Q3KNJ2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.63■□□□□ 0.73
Nhej1Q3KNJ2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nhej1Q3KNJ2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nhej1Q3KNJ2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.63■□□□□ 0.73
Nhej1Q3KNJ2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nhej1Q3KNJ2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nhej1Q3KNJ2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nhej1Q3KNJ2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nhej1Q3KNJ2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nhej1Q3KNJ2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Nhej1Q3KNJ2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nhej1Q3KNJ2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms