Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC10□□□□□ -0.81
Ush2AQ2QI47 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10□□□□□ -0.81
Ush2AQ2QI47 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ush2AQ2QI47 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ush2AQ2QI47 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Ush2AQ2QI47 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC10□□□□□ -0.81
Ush2AQ2QI47 Gm8000-201ENSMUST00000188378 592 ntBASIC10□□□□□ -0.81
Ush2AQ2QI47 Gm18195-201ENSMUST00000207604 706 ntBASIC10□□□□□ -0.81
Ush2AQ2QI47 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ush2AQ2QI47 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ush2AQ2QI47 Gm43353-201ENSMUST00000199224 1295 ntBASIC10□□□□□ -0.81
Ush2AQ2QI47 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC10□□□□□ -0.81
Ush2AQ2QI47 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ush2AQ2QI47 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ush2AQ2QI47 AC158982.1-201ENSMUST00000228377 901 ntBASIC9.99□□□□□ -0.81
Ush2AQ2QI47 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC9.99□□□□□ -0.81
Ush2AQ2QI47 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Ush2AQ2QI47 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC9.99□□□□□ -0.81
Ush2AQ2QI47 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Ush2AQ2QI47 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Ush2AQ2QI47 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ush2AQ2QI47 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ush2AQ2QI47 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ush2AQ2QI47 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ush2AQ2QI47 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
Ush2AQ2QI47 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC9.99□□□□□ -0.81
Ush2AQ2QI47 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ush2AQ2QI47 Gm10175-201ENSMUST00000086013 645 ntBASIC9.99□□□□□ -0.81
Ush2AQ2QI47 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Ush2AQ2QI47 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ush2AQ2QI47 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ush2AQ2QI47 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC9.99□□□□□ -0.81
Ush2AQ2QI47 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ush2AQ2QI47 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ush2AQ2QI47 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ush2AQ2QI47 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ush2AQ2QI47 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Ush2AQ2QI47 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Ush2AQ2QI47 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ush2AQ2QI47 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Ush2AQ2QI47 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ush2AQ2QI47 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ush2AQ2QI47 Gm6736-201ENSMUST00000166583 948 ntBASIC9.98□□□□□ -0.81
Ush2AQ2QI47 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ush2AQ2QI47 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ush2AQ2QI47 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ush2AQ2QI47 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ush2AQ2QI47 Gm10654-201ENSMUST00000098653 1633 ntBASIC9.98□□□□□ -0.81
Ush2AQ2QI47 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC9.98□□□□□ -0.81
Ush2AQ2QI47 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC9.98□□□□□ -0.81
Ush2AQ2QI47 Gm10138-203ENSMUST00000206952 366 ntBASIC9.98□□□□□ -0.81
Ush2AQ2QI47 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ush2AQ2QI47 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ush2AQ2QI47 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Ush2AQ2QI47 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ush2AQ2QI47 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC9.97□□□□□ -0.81
Ush2AQ2QI47 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC9.97□□□□□ -0.81
Ush2AQ2QI47 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ush2AQ2QI47 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ush2AQ2QI47 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ush2AQ2QI47 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Ush2AQ2QI47 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ush2AQ2QI47 Gm43403-201ENSMUST00000198011 1786 ntBASIC9.97□□□□□ -0.81
Ush2AQ2QI47 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ush2AQ2QI47 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC9.97□□□□□ -0.81
Ush2AQ2QI47 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ush2AQ2QI47 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC9.97□□□□□ -0.81
Ush2AQ2QI47 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC9.97□□□□□ -0.81
Ush2AQ2QI47 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ush2AQ2QI47 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Ush2AQ2QI47 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ush2AQ2QI47 Gm17641-201ENSMUST00000166328 2350 ntBASIC9.97□□□□□ -0.81
Ush2AQ2QI47 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC9.97□□□□□ -0.81
Ush2AQ2QI47 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Ush2AQ2QI47 Gm2213-201ENSMUST00000197485 688 ntBASIC9.97□□□□□ -0.81
Ush2AQ2QI47 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ush2AQ2QI47 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Ush2AQ2QI47 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Ush2AQ2QI47 Gm11452-201ENSMUST00000122376 690 ntBASIC9.96□□□□□ -0.81
Ush2AQ2QI47 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
Ush2AQ2QI47 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.81
Ush2AQ2QI47 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ush2AQ2QI47 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ush2AQ2QI47 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ush2AQ2QI47 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
Ush2AQ2QI47 CT943659.1-201ENSMUST00000215459 326 ntBASIC9.96□□□□□ -0.82
Ush2AQ2QI47 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ush2AQ2QI47 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ush2AQ2QI47 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ush2AQ2QI47 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ush2AQ2QI47 AC122428.2-201ENSMUST00000216321 1832 ntBASIC9.96□□□□□ -0.82
Ush2AQ2QI47 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ush2AQ2QI47 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC9.96□□□□□ -0.82
Ush2AQ2QI47 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Ush2AQ2QI47 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
Ush2AQ2QI47 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ush2AQ2QI47 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ush2AQ2QI47 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC9.95□□□□□ -0.82
Ush2AQ2QI47 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ush2AQ2QI47 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms