Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IhhP97812 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.26■□□□□ 0.67
IhhP97812 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
IhhP97812 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
IhhP97812 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
IhhP97812 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IhhP97812 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.25■□□□□ 0.67
IhhP97812 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IhhP97812 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IhhP97812 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.25■□□□□ 0.67
IhhP97812 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IhhP97812 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IhhP97812 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IhhP97812 Dio3-201ENSMUST00000097228 1449 ntBASIC19.25■□□□□ 0.67
IhhP97812 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IhhP97812 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IhhP97812 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IhhP97812 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IhhP97812 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
IhhP97812 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.24■□□□□ 0.67
IhhP97812 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IhhP97812 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
IhhP97812 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IhhP97812 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
IhhP97812 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IhhP97812 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.24■□□□□ 0.67
IhhP97812 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IhhP97812 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IhhP97812 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
IhhP97812 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IhhP97812 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
IhhP97812 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.23■□□□□ 0.67
IhhP97812 Gm22325-201ENSMUST00000158904 308 ntBASIC19.23■□□□□ 0.67
IhhP97812 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
IhhP97812 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IhhP97812 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.23■□□□□ 0.67
IhhP97812 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IhhP97812 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
IhhP97812 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IhhP97812 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
IhhP97812 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IhhP97812 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
IhhP97812 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IhhP97812 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IhhP97812 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.22■□□□□ 0.67
IhhP97812 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.22■□□□□ 0.67
IhhP97812 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IhhP97812 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IhhP97812 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IhhP97812 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IhhP97812 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
IhhP97812 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
IhhP97812 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
IhhP97812 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
IhhP97812 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
IhhP97812 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
IhhP97812 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IhhP97812 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
IhhP97812 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IhhP97812 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IhhP97812 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
IhhP97812 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IhhP97812 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
IhhP97812 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IhhP97812 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
IhhP97812 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IhhP97812 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
IhhP97812 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.19■□□□□ 0.66
IhhP97812 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
IhhP97812 Gm11249-201ENSMUST00000117071 859 ntBASIC19.19■□□□□ 0.66
IhhP97812 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
IhhP97812 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.19■□□□□ 0.66
IhhP97812 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.19■□□□□ 0.66
IhhP97812 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IhhP97812 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IhhP97812 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IhhP97812 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
IhhP97812 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IhhP97812 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
IhhP97812 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
IhhP97812 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IhhP97812 Gm2559-201ENSMUST00000201323 363 ntBASIC19.18■□□□□ 0.66
IhhP97812 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.18■□□□□ 0.66
IhhP97812 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
IhhP97812 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IhhP97812 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IhhP97812 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.18■□□□□ 0.66
IhhP97812 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
IhhP97812 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.17■□□□□ 0.66
IhhP97812 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
IhhP97812 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
IhhP97812 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.17■□□□□ 0.66
IhhP97812 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.17■□□□□ 0.66
IhhP97812 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.17■□□□□ 0.66
IhhP97812 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IhhP97812 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IhhP97812 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
IhhP97812 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
IhhP97812 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IhhP97812 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms