Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim43cP86449 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.11■□□□□ 0.81
Trim43cP86449 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim43cP86449 Gm37179-201ENSMUST00000194862 823 ntBASIC20.11■□□□□ 0.81
Trim43cP86449 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.11■□□□□ 0.81
Trim43cP86449 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim43cP86449 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim43cP86449 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim43cP86449 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trim43cP86449 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim43cP86449 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Trim43cP86449 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim43cP86449 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim43cP86449 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim43cP86449 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.1■□□□□ 0.81
Trim43cP86449 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.1■□□□□ 0.81
Trim43cP86449 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim43cP86449 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim43cP86449 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim43cP86449 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim43cP86449 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Trim43cP86449 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.1■□□□□ 0.81
Trim43cP86449 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim43cP86449 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim43cP86449 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim43cP86449 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim43cP86449 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim43cP86449 Gm13148-201ENSMUST00000118892 745 ntBASIC20.09■□□□□ 0.81
Trim43cP86449 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Trim43cP86449 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim43cP86449 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim43cP86449 Gm6365-201ENSMUST00000054711 744 ntBASIC20.09■□□□□ 0.81
Trim43cP86449 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim43cP86449 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trim43cP86449 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.09■□□□□ 0.81
Trim43cP86449 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim43cP86449 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim43cP86449 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
Trim43cP86449 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Trim43cP86449 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trim43cP86449 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.08■□□□□ 0.81
Trim43cP86449 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.08■□□□□ 0.81
Trim43cP86449 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Trim43cP86449 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim43cP86449 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Trim43cP86449 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim43cP86449 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.07■□□□□ 0.8
Trim43cP86449 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.07■□□□□ 0.8
Trim43cP86449 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim43cP86449 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim43cP86449 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim43cP86449 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.06■□□□□ 0.8
Trim43cP86449 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim43cP86449 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim43cP86449 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.06■□□□□ 0.8
Trim43cP86449 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim43cP86449 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.06■□□□□ 0.8
Trim43cP86449 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.06■□□□□ 0.8
Trim43cP86449 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim43cP86449 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim43cP86449 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.06■□□□□ 0.8
Trim43cP86449 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim43cP86449 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim43cP86449 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43cP86449 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43cP86449 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
Trim43cP86449 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trim43cP86449 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.05■□□□□ 0.8
Trim43cP86449 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43cP86449 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43cP86449 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trim43cP86449 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43cP86449 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43cP86449 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43cP86449 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43cP86449 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43cP86449 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43cP86449 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43cP86449 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43cP86449 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43cP86449 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43cP86449 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.04■□□□□ 0.8
Trim43cP86449 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43cP86449 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.04■□□□□ 0.8
Trim43cP86449 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43cP86449 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43cP86449 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43cP86449 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43cP86449 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43cP86449 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Trim43cP86449 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43cP86449 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43cP86449 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.03■□□□□ 0.8
Trim43cP86449 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trim43cP86449 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43cP86449 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43cP86449 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43cP86449 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.03■□□□□ 0.8
Trim43cP86449 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43cP86449 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms