Protein–RNA interactions for Protein: P70441

Slc9a3r1, Na(+)/H(+) exchange regulatory cofactor NHE-RF1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a3r1P70441 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Slc9a3r1P70441 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc9a3r1P70441 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc9a3r1P70441 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc9a3r1P70441 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc9a3r1P70441 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Slc9a3r1P70441 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc9a3r1P70441 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Slc9a3r1P70441 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.63■□□□□ 0.41
Slc9a3r1P70441 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc9a3r1P70441 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Slc9a3r1P70441 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slc9a3r1P70441 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc9a3r1P70441 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc9a3r1P70441 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.62■□□□□ 0.41
Slc9a3r1P70441 Gm2559-201ENSMUST00000201323 363 ntBASIC17.62■□□□□ 0.41
Slc9a3r1P70441 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slc9a3r1P70441 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.62■□□□□ 0.41
Slc9a3r1P70441 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.62■□□□□ 0.41
Slc9a3r1P70441 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc9a3r1P70441 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc9a3r1P70441 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc9a3r1P70441 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc9a3r1P70441 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc9a3r1P70441 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc9a3r1P70441 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc9a3r1P70441 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc9a3r1P70441 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc9a3r1P70441 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc9a3r1P70441 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc9a3r1P70441 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc9a3r1P70441 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc9a3r1P70441 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc9a3r1P70441 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc9a3r1P70441 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.61■□□□□ 0.41
Slc9a3r1P70441 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc9a3r1P70441 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc9a3r1P70441 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc9a3r1P70441 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.61■□□□□ 0.41
Slc9a3r1P70441 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Slc9a3r1P70441 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc9a3r1P70441 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc9a3r1P70441 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc9a3r1P70441 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Slc9a3r1P70441 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.6■□□□□ 0.41
Slc9a3r1P70441 Gm44549-201ENSMUST00000208351 577 ntBASIC17.6■□□□□ 0.41
Slc9a3r1P70441 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Slc9a3r1P70441 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc9a3r1P70441 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc9a3r1P70441 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc9a3r1P70441 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.6■□□□□ 0.41
Slc9a3r1P70441 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc9a3r1P70441 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc9a3r1P70441 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc9a3r1P70441 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc9a3r1P70441 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc9a3r1P70441 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc9a3r1P70441 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc9a3r1P70441 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc9a3r1P70441 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Slc9a3r1P70441 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.59■□□□□ 0.41
Slc9a3r1P70441 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc9a3r1P70441 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Slc9a3r1P70441 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc9a3r1P70441 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Slc9a3r1P70441 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc9a3r1P70441 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc9a3r1P70441 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc9a3r1P70441 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc9a3r1P70441 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc9a3r1P70441 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Slc9a3r1P70441 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc9a3r1P70441 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Slc9a3r1P70441 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Slc9a3r1P70441 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Slc9a3r1P70441 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Slc9a3r1P70441 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc9a3r1P70441 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.58■□□□□ 0.41
Slc9a3r1P70441 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Slc9a3r1P70441 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Slc9a3r1P70441 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.58■□□□□ 0.4
Slc9a3r1P70441 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Slc9a3r1P70441 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.58■□□□□ 0.4
Slc9a3r1P70441 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Slc9a3r1P70441 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
Slc9a3r1P70441 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Slc9a3r1P70441 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc9a3r1P70441 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc9a3r1P70441 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc9a3r1P70441 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Slc9a3r1P70441 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc9a3r1P70441 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Slc9a3r1P70441 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc9a3r1P70441 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc9a3r1P70441 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc9a3r1P70441 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc9a3r1P70441 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Slc9a3r1P70441 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc9a3r1P70441 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.57■□□□□ 0.4
Slc9a3r1P70441 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms