Protein–RNA interactions for Protein: P70424

Erbb2, Receptor tyrosine-protein kinase erbB-2, mousemouse

Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Erbb2P70424 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Erbb2P70424 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Erbb2P70424 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.5■□□□□ 0.87
Erbb2P70424 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Erbb2P70424 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Erbb2P70424 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.5■□□□□ 0.87
Erbb2P70424 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Erbb2P70424 Flg-201ENSMUST00000050758 1488 ntBASIC20.5■□□□□ 0.87
Erbb2P70424 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Erbb2P70424 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Erbb2P70424 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.49■□□□□ 0.87
Erbb2P70424 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Erbb2P70424 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Erbb2P70424 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.49■□□□□ 0.87
Erbb2P70424 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Erbb2P70424 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Erbb2P70424 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Erbb2P70424 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Erbb2P70424 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Erbb2P70424 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Erbb2P70424 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Erbb2P70424 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Erbb2P70424 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Erbb2P70424 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Erbb2P70424 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Erbb2P70424 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Erbb2P70424 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.48■□□□□ 0.87
Erbb2P70424 Gm11249-201ENSMUST00000117071 859 ntBASIC20.48■□□□□ 0.87
Erbb2P70424 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.48■□□□□ 0.87
Erbb2P70424 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Erbb2P70424 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.48■□□□□ 0.87
Erbb2P70424 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Erbb2P70424 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Erbb2P70424 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.48■□□□□ 0.87
Erbb2P70424 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Erbb2P70424 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Erbb2P70424 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.48■□□□□ 0.87
Erbb2P70424 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Erbb2P70424 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Erbb2P70424 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.47■□□□□ 0.87
Erbb2P70424 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.47■□□□□ 0.87
Erbb2P70424 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Erbb2P70424 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Erbb2P70424 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Erbb2P70424 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Erbb2P70424 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Erbb2P70424 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Erbb2P70424 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.46■□□□□ 0.87
Erbb2P70424 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Erbb2P70424 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Erbb2P70424 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
Erbb2P70424 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Erbb2P70424 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Erbb2P70424 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Erbb2P70424 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Erbb2P70424 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Erbb2P70424 Gm13168-201ENSMUST00000121771 632 ntBASIC20.45■□□□□ 0.86
Erbb2P70424 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Erbb2P70424 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Erbb2P70424 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Erbb2P70424 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Erbb2P70424 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Erbb2P70424 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Erbb2P70424 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Erbb2P70424 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Erbb2P70424 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Erbb2P70424 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Erbb2P70424 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Erbb2P70424 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Erbb2P70424 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Erbb2P70424 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Erbb2P70424 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Erbb2P70424 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Erbb2P70424 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Erbb2P70424 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Erbb2P70424 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Erbb2P70424 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Erbb2P70424 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Erbb2P70424 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Erbb2P70424 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Erbb2P70424 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Erbb2P70424 Gm22240-201ENSMUST00000175225 82 ntBASIC20.43■□□□□ 0.86
Erbb2P70424 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.43■□□□□ 0.86
Erbb2P70424 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Erbb2P70424 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Erbb2P70424 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.43■□□□□ 0.86
Erbb2P70424 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.43■□□□□ 0.86
Erbb2P70424 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Erbb2P70424 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Erbb2P70424 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Erbb2P70424 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Erbb2P70424 Gm11927-201ENSMUST00000118472 759 ntBASIC20.42■□□□□ 0.86
Erbb2P70424 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.42■□□□□ 0.86
Erbb2P70424 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Erbb2P70424 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Erbb2P70424 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Erbb2P70424 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Erbb2P70424 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Erbb2P70424 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Erbb2P70424 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms