Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.28□□□□□ -0.12
Vamp3P63024 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp3P63024 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp3P63024 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC14.28□□□□□ -0.12
Vamp3P63024 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.28□□□□□ -0.12
Vamp3P63024 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.28□□□□□ -0.12
Vamp3P63024 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.28□□□□□ -0.12
Vamp3P63024 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp3P63024 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp3P63024 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp3P63024 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp3P63024 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp3P63024 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp3P63024 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vamp3P63024 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp3P63024 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp3P63024 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.28□□□□□ -0.12
Vamp3P63024 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp3P63024 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp3P63024 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp3P63024 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp3P63024 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp3P63024 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp3P63024 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp3P63024 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp3P63024 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp3P63024 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp3P63024 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp3P63024 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp3P63024 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vamp3P63024 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC14.27□□□□□ -0.13
Vamp3P63024 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vamp3P63024 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vamp3P63024 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vamp3P63024 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.27□□□□□ -0.13
Vamp3P63024 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vamp3P63024 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vamp3P63024 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp3P63024 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp3P63024 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp3P63024 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp3P63024 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Vamp3P63024 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp3P63024 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp3P63024 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp3P63024 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp3P63024 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Vamp3P63024 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Vamp3P63024 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp3P63024 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Vamp3P63024 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp3P63024 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp3P63024 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp3P63024 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp3P63024 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp3P63024 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp3P63024 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp3P63024 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.25□□□□□ -0.13
Vamp3P63024 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp3P63024 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp3P63024 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp3P63024 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp3P63024 Gm12818-201ENSMUST00000117562 1349 ntBASIC14.25□□□□□ -0.13
Vamp3P63024 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp3P63024 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp3P63024 Gm8109-201ENSMUST00000194076 746 ntBASIC14.25□□□□□ -0.13
Vamp3P63024 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp3P63024 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp3P63024 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Vamp3P63024 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vamp3P63024 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vamp3P63024 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp3P63024 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp3P63024 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp3P63024 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp3P63024 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp3P63024 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp3P63024 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp3P63024 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp3P63024 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp3P63024 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp3P63024 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Vamp3P63024 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp3P63024 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp3P63024 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp3P63024 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Vamp3P63024 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp3P63024 Nkain2-201ENSMUST00000092602 558 ntBASIC14.24□□□□□ -0.13
Vamp3P63024 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Vamp3P63024 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp3P63024 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Vamp3P63024 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp3P63024 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp3P63024 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp3P63024 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Vamp3P63024 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp3P63024 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp3P63024 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp3P63024 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp3P63024 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms