Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm3P62311 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm3P62311 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm3P62311 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.88■□□□□ 0.29
Lsm3P62311 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Lsm3P62311 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm3P62311 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm3P62311 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm3P62311 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm3P62311 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm3P62311 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm3P62311 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm3P62311 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Lsm3P62311 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm3P62311 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm3P62311 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm3P62311 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.87■□□□□ 0.29
Lsm3P62311 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.87■□□□□ 0.29
Lsm3P62311 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.87■□□□□ 0.29
Lsm3P62311 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm3P62311 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm3P62311 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Lsm3P62311 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm3P62311 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm3P62311 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm3P62311 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm3P62311 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm3P62311 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm3P62311 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm3P62311 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm3P62311 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm3P62311 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm3P62311 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Lsm3P62311 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm3P62311 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm3P62311 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm3P62311 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Lsm3P62311 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
Lsm3P62311 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm3P62311 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Lsm3P62311 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm3P62311 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm3P62311 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm3P62311 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Lsm3P62311 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm3P62311 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.85■□□□□ 0.29
Lsm3P62311 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm3P62311 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm3P62311 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm3P62311 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm3P62311 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.85■□□□□ 0.29
Lsm3P62311 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Lsm3P62311 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.85■□□□□ 0.29
Lsm3P62311 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm3P62311 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm3P62311 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm3P62311 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.85■□□□□ 0.29
Lsm3P62311 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Lsm3P62311 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm3P62311 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.84■□□□□ 0.29
Lsm3P62311 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm3P62311 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.84■□□□□ 0.29
Lsm3P62311 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.84■□□□□ 0.29
Lsm3P62311 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Lsm3P62311 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm3P62311 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm3P62311 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.84■□□□□ 0.29
Lsm3P62311 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm3P62311 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
Lsm3P62311 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm3P62311 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm3P62311 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm3P62311 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm3P62311 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm3P62311 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm3P62311 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lsm3P62311 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Lsm3P62311 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lsm3P62311 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm3P62311 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.83■□□□□ 0.28
Lsm3P62311 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm3P62311 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Lsm3P62311 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm3P62311 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm3P62311 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.83■□□□□ 0.28
Lsm3P62311 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm3P62311 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm3P62311 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm3P62311 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm3P62311 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm3P62311 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
Lsm3P62311 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm3P62311 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Lsm3P62311 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Lsm3P62311 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm3P62311 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm3P62311 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Lsm3P62311 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm3P62311 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Lsm3P62311 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms