Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Sec61a1P61620 AA386476-201ENSMUST00000098781 1665 ntBASIC16.23■□□□□ 0.19
Sec61a1P61620 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sec61a1P61620 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sec61a1P61620 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sec61a1P61620 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.22■□□□□ 0.19
Sec61a1P61620 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a1P61620 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a1P61620 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a1P61620 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a1P61620 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a1P61620 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.22■□□□□ 0.19
Sec61a1P61620 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.22■□□□□ 0.19
Sec61a1P61620 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.22■□□□□ 0.19
Sec61a1P61620 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a1P61620 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a1P61620 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a1P61620 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.22■□□□□ 0.19
Sec61a1P61620 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a1P61620 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.22■□□□□ 0.19
Sec61a1P61620 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a1P61620 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a1P61620 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Sec61a1P61620 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a1P61620 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Sec61a1P61620 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Sec61a1P61620 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sec61a1P61620 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sec61a1P61620 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sec61a1P61620 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sec61a1P61620 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sec61a1P61620 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sec61a1P61620 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sec61a1P61620 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Sec61a1P61620 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sec61a1P61620 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Sec61a1P61620 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sec61a1P61620 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sec61a1P61620 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a1P61620 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.2■□□□□ 0.18
Sec61a1P61620 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a1P61620 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a1P61620 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a1P61620 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.2■□□□□ 0.18
Sec61a1P61620 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a1P61620 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a1P61620 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.2■□□□□ 0.18
Sec61a1P61620 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a1P61620 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a1P61620 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Sec61a1P61620 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Sec61a1P61620 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a1P61620 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a1P61620 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a1P61620 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a1P61620 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a1P61620 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a1P61620 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sec61a1P61620 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Sec61a1P61620 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sec61a1P61620 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sec61a1P61620 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sec61a1P61620 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sec61a1P61620 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sec61a1P61620 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.19■□□□□ 0.18
Sec61a1P61620 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sec61a1P61620 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.19■□□□□ 0.18
Sec61a1P61620 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.19■□□□□ 0.18
Sec61a1P61620 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sec61a1P61620 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.19■□□□□ 0.18
Sec61a1P61620 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sec61a1P61620 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sec61a1P61620 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sec61a1P61620 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Sec61a1P61620 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sec61a1P61620 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a1P61620 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a1P61620 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a1P61620 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a1P61620 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a1P61620 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
Sec61a1P61620 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sec61a1P61620 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sec61a1P61620 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a1P61620 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a1P61620 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a1P61620 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a1P61620 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.18■□□□□ 0.18
Sec61a1P61620 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a1P61620 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sec61a1P61620 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a1P61620 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sec61a1P61620 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.18■□□□□ 0.18
Sec61a1P61620 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a1P61620 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sec61a1P61620 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a1P61620 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.17■□□□□ 0.18
Sec61a1P61620 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a1P61620 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.17■□□□□ 0.18
Sec61a1P61620 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms