Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Ube2d3P61079 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube2d3P61079 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube2d3P61079 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ube2d3P61079 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
Ube2d3P61079 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube2d3P61079 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
Ube2d3P61079 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.19□□□□□ -0.3
Ube2d3P61079 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ube2d3P61079 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ube2d3P61079 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube2d3P61079 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube2d3P61079 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ube2d3P61079 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.19□□□□□ -0.3
Ube2d3P61079 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ube2d3P61079 Gm27454-201ENSMUST00000185090 204 ntBASIC13.19□□□□□ -0.3
Ube2d3P61079 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.19□□□□□ -0.3
Ube2d3P61079 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.19□□□□□ -0.3
Ube2d3P61079 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube2d3P61079 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube2d3P61079 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.19□□□□□ -0.3
Ube2d3P61079 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.19□□□□□ -0.3
Ube2d3P61079 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube2d3P61079 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube2d3P61079 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube2d3P61079 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube2d3P61079 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ube2d3P61079 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube2d3P61079 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Ube2d3P61079 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2d3P61079 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2d3P61079 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2d3P61079 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2d3P61079 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2d3P61079 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2d3P61079 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2d3P61079 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.18□□□□□ -0.3
Ube2d3P61079 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC13.18□□□□□ -0.3
Ube2d3P61079 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2d3P61079 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.18□□□□□ -0.3
Ube2d3P61079 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ube2d3P61079 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2d3P61079 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2d3P61079 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.17□□□□□ -0.3
Ube2d3P61079 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2d3P61079 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2d3P61079 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2d3P61079 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2d3P61079 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Ube2d3P61079 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2d3P61079 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2d3P61079 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2d3P61079 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ube2d3P61079 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.17□□□□□ -0.3
Ube2d3P61079 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2d3P61079 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.17□□□□□ -0.3
Ube2d3P61079 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ube2d3P61079 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2d3P61079 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.17□□□□□ -0.3
Ube2d3P61079 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.17□□□□□ -0.3
Ube2d3P61079 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ube2d3P61079 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2d3P61079 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2d3P61079 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.17□□□□□ -0.3
Ube2d3P61079 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2d3P61079 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2d3P61079 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2d3P61079 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2d3P61079 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2d3P61079 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.16□□□□□ -0.3
Ube2d3P61079 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ube2d3P61079 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube2d3P61079 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube2d3P61079 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube2d3P61079 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC13.16□□□□□ -0.3
Ube2d3P61079 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ube2d3P61079 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube2d3P61079 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube2d3P61079 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.16□□□□□ -0.3
Ube2d3P61079 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ube2d3P61079 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube2d3P61079 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ube2d3P61079 Gm6139-201ENSMUST00000079261 882 ntBASIC13.16□□□□□ -0.3
Ube2d3P61079 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ube2d3P61079 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube2d3P61079 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.16□□□□□ -0.3
Ube2d3P61079 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube2d3P61079 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube2d3P61079 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.16□□□□□ -0.3
Ube2d3P61079 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube2d3P61079 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube2d3P61079 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube2d3P61079 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube2d3P61079 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube2d3P61079 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ube2d3P61079 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ube2d3P61079 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ube2d3P61079 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ube2d3P61079 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ube2d3P61079 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms