Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NcanP55066 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NcanP55066 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NcanP55066 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NcanP55066 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NcanP55066 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NcanP55066 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NcanP55066 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NcanP55066 Gm7284-201ENSMUST00000131667 944 ntBASIC19.62■□□□□ 0.73
NcanP55066 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.62■□□□□ 0.73
NcanP55066 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NcanP55066 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NcanP55066 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NcanP55066 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NcanP55066 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NcanP55066 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NcanP55066 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NcanP55066 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NcanP55066 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NcanP55066 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NcanP55066 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NcanP55066 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.61■□□□□ 0.73
NcanP55066 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NcanP55066 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NcanP55066 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
NcanP55066 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NcanP55066 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NcanP55066 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.6■□□□□ 0.73
NcanP55066 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NcanP55066 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.6■□□□□ 0.73
NcanP55066 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NcanP55066 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NcanP55066 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NcanP55066 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NcanP55066 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NcanP55066 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.59■□□□□ 0.73
NcanP55066 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NcanP55066 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NcanP55066 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
NcanP55066 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NcanP55066 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
NcanP55066 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NcanP55066 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NcanP55066 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.59■□□□□ 0.73
NcanP55066 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NcanP55066 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NcanP55066 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NcanP55066 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.73
NcanP55066 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NcanP55066 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
NcanP55066 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NcanP55066 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NcanP55066 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.58■□□□□ 0.72
NcanP55066 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NcanP55066 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.58■□□□□ 0.72
NcanP55066 Gm17661-201ENSMUST00000170317 270 ntBASIC19.58■□□□□ 0.72
NcanP55066 Mir5130-201ENSMUST00000175160 84 ntBASIC19.58■□□□□ 0.72
NcanP55066 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.58■□□□□ 0.72
NcanP55066 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NcanP55066 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
NcanP55066 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NcanP55066 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.58■□□□□ 0.72
NcanP55066 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.58■□□□□ 0.72
NcanP55066 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NcanP55066 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NcanP55066 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NcanP55066 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.57■□□□□ 0.72
NcanP55066 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NcanP55066 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NcanP55066 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NcanP55066 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.57■□□□□ 0.72
NcanP55066 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NcanP55066 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
NcanP55066 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.57■□□□□ 0.72
NcanP55066 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
NcanP55066 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NcanP55066 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NcanP55066 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NcanP55066 Gm12085-201ENSMUST00000119263 940 ntBASIC19.56■□□□□ 0.72
NcanP55066 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
NcanP55066 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.56■□□□□ 0.72
NcanP55066 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NcanP55066 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NcanP55066 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NcanP55066 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NcanP55066 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NcanP55066 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NcanP55066 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NcanP55066 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NcanP55066 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NcanP55066 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.55■□□□□ 0.72
NcanP55066 Gm38285-201ENSMUST00000192928 922 ntBASIC19.55■□□□□ 0.72
NcanP55066 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.55■□□□□ 0.72
NcanP55066 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NcanP55066 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NcanP55066 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.54■□□□□ 0.72
NcanP55066 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NcanP55066 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NcanP55066 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.54■□□□□ 0.72
NcanP55066 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms