Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdx1P52946 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Pdx1P52946 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdx1P52946 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pdx1P52946 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pdx1P52946 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pdx1P52946 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pdx1P52946 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pdx1P52946 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdx1P52946 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdx1P52946 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdx1P52946 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.28■□□□□ 0.52
Pdx1P52946 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdx1P52946 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.27■□□□□ 0.52
Pdx1P52946 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pdx1P52946 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdx1P52946 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pdx1P52946 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.27■□□□□ 0.52
Pdx1P52946 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdx1P52946 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdx1P52946 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.27■□□□□ 0.52
Pdx1P52946 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.27■□□□□ 0.52
Pdx1P52946 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdx1P52946 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Pdx1P52946 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdx1P52946 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdx1P52946 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pdx1P52946 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pdx1P52946 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pdx1P52946 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pdx1P52946 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdx1P52946 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.26■□□□□ 0.51
Pdx1P52946 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdx1P52946 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdx1P52946 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdx1P52946 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.26■□□□□ 0.51
Pdx1P52946 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdx1P52946 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.26■□□□□ 0.51
Pdx1P52946 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.26■□□□□ 0.51
Pdx1P52946 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdx1P52946 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pdx1P52946 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdx1P52946 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.26■□□□□ 0.51
Pdx1P52946 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.26■□□□□ 0.51
Pdx1P52946 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdx1P52946 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdx1P52946 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.25■□□□□ 0.51
Pdx1P52946 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdx1P52946 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdx1P52946 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pdx1P52946 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdx1P52946 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdx1P52946 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.25■□□□□ 0.51
Pdx1P52946 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pdx1P52946 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pdx1P52946 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.25■□□□□ 0.51
Pdx1P52946 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdx1P52946 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pdx1P52946 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.25■□□□□ 0.51
Pdx1P52946 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdx1P52946 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.25■□□□□ 0.51
Pdx1P52946 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdx1P52946 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdx1P52946 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdx1P52946 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdx1P52946 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pdx1P52946 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.24■□□□□ 0.51
Pdx1P52946 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Pdx1P52946 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pdx1P52946 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdx1P52946 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdx1P52946 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdx1P52946 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdx1P52946 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Pdx1P52946 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdx1P52946 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdx1P52946 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdx1P52946 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pdx1P52946 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdx1P52946 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Pdx1P52946 Gm13148-201ENSMUST00000118892 745 ntBASIC18.23■□□□□ 0.51
Pdx1P52946 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pdx1P52946 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.23■□□□□ 0.51
Pdx1P52946 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdx1P52946 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.23■□□□□ 0.51
Pdx1P52946 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdx1P52946 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdx1P52946 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdx1P52946 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdx1P52946 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Pdx1P52946 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdx1P52946 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pdx1P52946 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdx1P52946 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.22■□□□□ 0.51
Pdx1P52946 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdx1P52946 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pdx1P52946 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdx1P52946 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.22■□□□□ 0.51
Pdx1P52946 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pdx1P52946 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms