Protein–RNA interactions for Protein: P51642

Cntf, Ciliary neurotrophic factor, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CntfP51642 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CntfP51642 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CntfP51642 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CntfP51642 Gm26833-201ENSMUST00000180899 440 ntBASIC17.32■□□□□ 0.36
CntfP51642 Gm45417-201ENSMUST00000209533 758 ntBASIC17.32■□□□□ 0.36
CntfP51642 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CntfP51642 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CntfP51642 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CntfP51642 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CntfP51642 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CntfP51642 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CntfP51642 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.31■□□□□ 0.36
CntfP51642 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CntfP51642 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CntfP51642 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CntfP51642 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CntfP51642 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.31■□□□□ 0.36
CntfP51642 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CntfP51642 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.31■□□□□ 0.36
CntfP51642 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CntfP51642 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CntfP51642 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CntfP51642 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CntfP51642 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CntfP51642 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CntfP51642 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CntfP51642 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CntfP51642 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CntfP51642 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CntfP51642 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CntfP51642 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
CntfP51642 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CntfP51642 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CntfP51642 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CntfP51642 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CntfP51642 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CntfP51642 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CntfP51642 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CntfP51642 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CntfP51642 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CntfP51642 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
CntfP51642 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CntfP51642 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CntfP51642 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.29■□□□□ 0.36
CntfP51642 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CntfP51642 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CntfP51642 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
CntfP51642 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CntfP51642 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CntfP51642 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CntfP51642 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CntfP51642 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.29■□□□□ 0.36
CntfP51642 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CntfP51642 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CntfP51642 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CntfP51642 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CntfP51642 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CntfP51642 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CntfP51642 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CntfP51642 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CntfP51642 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CntfP51642 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CntfP51642 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CntfP51642 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CntfP51642 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CntfP51642 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CntfP51642 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CntfP51642 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CntfP51642 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CntfP51642 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CntfP51642 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CntfP51642 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CntfP51642 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CntfP51642 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CntfP51642 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CntfP51642 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CntfP51642 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CntfP51642 Gm40848-201ENSMUST00000221998 324 ntBASIC17.27■□□□□ 0.36
CntfP51642 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CntfP51642 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CntfP51642 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CntfP51642 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CntfP51642 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CntfP51642 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CntfP51642 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.27■□□□□ 0.35
CntfP51642 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CntfP51642 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CntfP51642 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CntfP51642 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CntfP51642 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.27■□□□□ 0.35
CntfP51642 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CntfP51642 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.26■□□□□ 0.35
CntfP51642 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CntfP51642 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CntfP51642 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CntfP51642 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CntfP51642 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CntfP51642 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CntfP51642 Gm43017-201ENSMUST00000198296 752 ntBASIC17.26■□□□□ 0.35
CntfP51642 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms