Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.34■□□□□ 0.53
Krt6aP50446 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt6aP50446 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.34■□□□□ 0.53
Krt6aP50446 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.34■□□□□ 0.53
Krt6aP50446 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.34■□□□□ 0.53
Krt6aP50446 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Krt6aP50446 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt6aP50446 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Krt6aP50446 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.34■□□□□ 0.53
Krt6aP50446 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt6aP50446 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Krt6aP50446 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt6aP50446 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt6aP50446 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt6aP50446 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Krt6aP50446 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Krt6aP50446 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Krt6aP50446 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.33■□□□□ 0.53
Krt6aP50446 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Krt6aP50446 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Krt6aP50446 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.33■□□□□ 0.52
Krt6aP50446 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt6aP50446 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt6aP50446 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt6aP50446 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt6aP50446 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt6aP50446 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt6aP50446 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt6aP50446 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt6aP50446 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt6aP50446 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krt6aP50446 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krt6aP50446 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Krt6aP50446 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krt6aP50446 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Krt6aP50446 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krt6aP50446 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.32■□□□□ 0.52
Krt6aP50446 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krt6aP50446 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.32■□□□□ 0.52
Krt6aP50446 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.32■□□□□ 0.52
Krt6aP50446 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.32■□□□□ 0.52
Krt6aP50446 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krt6aP50446 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Krt6aP50446 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krt6aP50446 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krt6aP50446 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Krt6aP50446 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Krt6aP50446 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.31■□□□□ 0.52
Krt6aP50446 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krt6aP50446 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krt6aP50446 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krt6aP50446 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
Krt6aP50446 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Krt6aP50446 Gm12821-201ENSMUST00000120022 600 ntBASIC18.31■□□□□ 0.52
Krt6aP50446 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krt6aP50446 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krt6aP50446 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krt6aP50446 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Krt6aP50446 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Krt6aP50446 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Krt6aP50446 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Krt6aP50446 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Krt6aP50446 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Krt6aP50446 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Krt6aP50446 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Krt6aP50446 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Krt6aP50446 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Krt6aP50446 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Krt6aP50446 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Krt6aP50446 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.3■□□□□ 0.52
Krt6aP50446 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Krt6aP50446 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Krt6aP50446 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Krt6aP50446 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Krt6aP50446 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Krt6aP50446 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Krt6aP50446 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Krt6aP50446 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Krt6aP50446 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Krt6aP50446 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Krt6aP50446 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Krt6aP50446 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Krt6aP50446 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Krt6aP50446 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Krt6aP50446 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Krt6aP50446 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Krt6aP50446 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Krt6aP50446 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Krt6aP50446 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Krt6aP50446 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Krt6aP50446 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Krt6aP50446 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Krt6aP50446 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Krt6aP50446 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Krt6aP50446 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Krt6aP50446 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Krt6aP50446 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Krt6aP50446 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Krt6aP50446 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Krt6aP50446 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms