Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx3P48381 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.68■□□□□ 0.26
Rfx3P48381 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx3P48381 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx3P48381 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx3P48381 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx3P48381 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx3P48381 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx3P48381 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx3P48381 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx3P48381 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx3P48381 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx3P48381 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx3P48381 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx3P48381 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx3P48381 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx3P48381 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.67■□□□□ 0.26
Rfx3P48381 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx3P48381 Gm43060-201ENSMUST00000200621 289 ntBASIC16.67■□□□□ 0.26
Rfx3P48381 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Rfx3P48381 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx3P48381 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx3P48381 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx3P48381 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.66■□□□□ 0.26
Rfx3P48381 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx3P48381 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Rfx3P48381 Gm7860-201ENSMUST00000121190 879 ntBASIC16.66■□□□□ 0.26
Rfx3P48381 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Rfx3P48381 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.66■□□□□ 0.26
Rfx3P48381 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rfx3P48381 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Rfx3P48381 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx3P48381 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Rfx3P48381 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx3P48381 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx3P48381 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx3P48381 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx3P48381 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx3P48381 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx3P48381 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.66■□□□□ 0.26
Rfx3P48381 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx3P48381 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx3P48381 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx3P48381 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx3P48381 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx3P48381 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx3P48381 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx3P48381 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
Rfx3P48381 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx3P48381 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.65■□□□□ 0.26
Rfx3P48381 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.65■□□□□ 0.26
Rfx3P48381 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx3P48381 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.65■□□□□ 0.26
Rfx3P48381 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx3P48381 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rfx3P48381 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx3P48381 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.65■□□□□ 0.26
Rfx3P48381 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rfx3P48381 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx3P48381 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx3P48381 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx3P48381 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.64■□□□□ 0.25
Rfx3P48381 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rfx3P48381 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.64■□□□□ 0.25
Rfx3P48381 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx3P48381 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx3P48381 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.64■□□□□ 0.25
Rfx3P48381 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx3P48381 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx3P48381 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx3P48381 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.63■□□□□ 0.25
Rfx3P48381 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.63■□□□□ 0.25
Rfx3P48381 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.63■□□□□ 0.25
Rfx3P48381 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx3P48381 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rfx3P48381 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx3P48381 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx3P48381 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Rfx3P48381 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.63■□□□□ 0.25
Rfx3P48381 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx3P48381 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Rfx3P48381 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx3P48381 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx3P48381 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx3P48381 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rfx3P48381 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx3P48381 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx3P48381 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx3P48381 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx3P48381 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx3P48381 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx3P48381 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx3P48381 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx3P48381 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx3P48381 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx3P48381 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.62■□□□□ 0.25
Rfx3P48381 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.62■□□□□ 0.25
Rfx3P48381 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.62■□□□□ 0.25
Rfx3P48381 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.62■□□□□ 0.25
Rfx3P48381 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms