Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps4bP46467 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps4bP46467 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.72■□□□□ 0.59
Vps4bP46467 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps4bP46467 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vps4bP46467 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps4bP46467 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps4bP46467 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps4bP46467 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Vps4bP46467 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Vps4bP46467 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps4bP46467 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vps4bP46467 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vps4bP46467 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps4bP46467 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Vps4bP46467 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Vps4bP46467 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps4bP46467 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps4bP46467 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps4bP46467 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vps4bP46467 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps4bP46467 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps4bP46467 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Vps4bP46467 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps4bP46467 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps4bP46467 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps4bP46467 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vps4bP46467 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps4bP46467 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Vps4bP46467 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.7■□□□□ 0.58
Vps4bP46467 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vps4bP46467 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vps4bP46467 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps4bP46467 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps4bP46467 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps4bP46467 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vps4bP46467 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps4bP46467 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps4bP46467 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps4bP46467 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps4bP46467 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps4bP46467 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps4bP46467 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Vps4bP46467 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vps4bP46467 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps4bP46467 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps4bP46467 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps4bP46467 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps4bP46467 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps4bP46467 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps4bP46467 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.69■□□□□ 0.58
Vps4bP46467 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.69■□□□□ 0.58
Vps4bP46467 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vps4bP46467 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps4bP46467 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Vps4bP46467 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps4bP46467 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Vps4bP46467 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps4bP46467 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vps4bP46467 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps4bP46467 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps4bP46467 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Vps4bP46467 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps4bP46467 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.69■□□□□ 0.58
Vps4bP46467 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps4bP46467 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps4bP46467 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.68■□□□□ 0.58
Vps4bP46467 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps4bP46467 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps4bP46467 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps4bP46467 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.68■□□□□ 0.58
Vps4bP46467 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.68■□□□□ 0.58
Vps4bP46467 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.68■□□□□ 0.58
Vps4bP46467 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps4bP46467 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps4bP46467 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.68■□□□□ 0.58
Vps4bP46467 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.68■□□□□ 0.58
Vps4bP46467 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps4bP46467 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps4bP46467 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vps4bP46467 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps4bP46467 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps4bP46467 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps4bP46467 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vps4bP46467 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps4bP46467 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps4bP46467 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.67■□□□□ 0.58
Vps4bP46467 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.67■□□□□ 0.58
Vps4bP46467 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps4bP46467 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps4bP46467 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vps4bP46467 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps4bP46467 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vps4bP46467 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps4bP46467 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Vps4bP46467 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Vps4bP46467 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps4bP46467 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4bP46467 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4bP46467 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms