Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cxcl12P40224 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.13■□□□□ 0.65
Cxcl12P40224 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cxcl12P40224 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.13■□□□□ 0.65
Cxcl12P40224 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.13■□□□□ 0.65
Cxcl12P40224 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cxcl12P40224 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cxcl12P40224 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cxcl12P40224 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.13■□□□□ 0.65
Cxcl12P40224 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cxcl12P40224 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cxcl12P40224 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cxcl12P40224 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cxcl12P40224 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.12■□□□□ 0.65
Cxcl12P40224 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cxcl12P40224 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cxcl12P40224 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cxcl12P40224 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cxcl12P40224 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cxcl12P40224 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.12■□□□□ 0.65
Cxcl12P40224 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cxcl12P40224 Gm18032-201ENSMUST00000222541 538 ntBASIC19.12■□□□□ 0.65
Cxcl12P40224 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cxcl12P40224 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cxcl12P40224 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Cxcl12P40224 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cxcl12P40224 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cxcl12P40224 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cxcl12P40224 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.11■□□□□ 0.65
Cxcl12P40224 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.11■□□□□ 0.65
Cxcl12P40224 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cxcl12P40224 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.1■□□□□ 0.65
Cxcl12P40224 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cxcl12P40224 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cxcl12P40224 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cxcl12P40224 Gm45058-201ENSMUST00000205810 766 ntBASIC19.1■□□□□ 0.65
Cxcl12P40224 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cxcl12P40224 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cxcl12P40224 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cxcl12P40224 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cxcl12P40224 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl12P40224 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl12P40224 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cxcl12P40224 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cxcl12P40224 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.09■□□□□ 0.65
Cxcl12P40224 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl12P40224 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl12P40224 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl12P40224 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.09■□□□□ 0.65
Cxcl12P40224 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl12P40224 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl12P40224 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl12P40224 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
Cxcl12P40224 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl12P40224 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl12P40224 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl12P40224 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl12P40224 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl12P40224 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.09■□□□□ 0.65
Cxcl12P40224 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cxcl12P40224 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.08■□□□□ 0.64
Cxcl12P40224 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.08■□□□□ 0.64
Cxcl12P40224 Ank2-226ENSMUST00000189368 339 ntBASIC19.08■□□□□ 0.64
Cxcl12P40224 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Cxcl12P40224 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cxcl12P40224 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Cxcl12P40224 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Cxcl12P40224 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cxcl12P40224 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cxcl12P40224 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cxcl12P40224 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cxcl12P40224 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.07■□□□□ 0.64
Cxcl12P40224 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cxcl12P40224 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cxcl12P40224 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Cxcl12P40224 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.07■□□□□ 0.64
Cxcl12P40224 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.07■□□□□ 0.64
Cxcl12P40224 Gm38285-201ENSMUST00000192928 922 ntBASIC19.07■□□□□ 0.64
Cxcl12P40224 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.07■□□□□ 0.64
Cxcl12P40224 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Cxcl12P40224 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cxcl12P40224 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cxcl12P40224 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cxcl12P40224 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cxcl12P40224 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Cxcl12P40224 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cxcl12P40224 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cxcl12P40224 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cxcl12P40224 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cxcl12P40224 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cxcl12P40224 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cxcl12P40224 Gm27463-201ENSMUST00000183569 57 ntBASIC19.06■□□□□ 0.64
Cxcl12P40224 Mir6349-201ENSMUST00000184059 97 ntBASIC19.06■□□□□ 0.64
Cxcl12P40224 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.06■□□□□ 0.64
Cxcl12P40224 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cxcl12P40224 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Cxcl12P40224 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cxcl12P40224 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cxcl12P40224 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cxcl12P40224 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms