Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxa1P35582 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxa1P35582 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxa1P35582 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxa1P35582 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxa1P35582 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxa1P35582 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.09■□□□□ 0.33
Foxa1P35582 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxa1P35582 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxa1P35582 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxa1P35582 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Foxa1P35582 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxa1P35582 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Foxa1P35582 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Foxa1P35582 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
Foxa1P35582 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxa1P35582 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxa1P35582 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxa1P35582 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxa1P35582 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Foxa1P35582 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Foxa1P35582 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxa1P35582 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxa1P35582 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxa1P35582 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxa1P35582 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxa1P35582 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Foxa1P35582 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxa1P35582 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Foxa1P35582 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Foxa1P35582 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxa1P35582 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Foxa1P35582 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxa1P35582 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxa1P35582 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Foxa1P35582 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Foxa1P35582 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.07■□□□□ 0.32
Foxa1P35582 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxa1P35582 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.07■□□□□ 0.32
Foxa1P35582 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxa1P35582 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.07■□□□□ 0.32
Foxa1P35582 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxa1P35582 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Foxa1P35582 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Foxa1P35582 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxa1P35582 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxa1P35582 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Foxa1P35582 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxa1P35582 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Foxa1P35582 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxa1P35582 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.06■□□□□ 0.32
Foxa1P35582 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxa1P35582 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Foxa1P35582 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Foxa1P35582 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Foxa1P35582 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxa1P35582 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Foxa1P35582 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.06■□□□□ 0.32
Foxa1P35582 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxa1P35582 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Foxa1P35582 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.06■□□□□ 0.32
Foxa1P35582 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Foxa1P35582 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Foxa1P35582 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.05■□□□□ 0.32
Foxa1P35582 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Foxa1P35582 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxa1P35582 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Foxa1P35582 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxa1P35582 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.05■□□□□ 0.32
Foxa1P35582 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Foxa1P35582 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxa1P35582 Gm7290-201ENSMUST00000104990 617 ntBASIC17.05■□□□□ 0.32
Foxa1P35582 Gm12918-201ENSMUST00000120234 636 ntBASIC17.05■□□□□ 0.32
Foxa1P35582 Gm15710-201ENSMUST00000121821 636 ntBASIC17.05■□□□□ 0.32
Foxa1P35582 Gm5075-201ENSMUST00000196916 622 ntBASIC17.05■□□□□ 0.32
Foxa1P35582 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.05■□□□□ 0.32
Foxa1P35582 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.05■□□□□ 0.32
Foxa1P35582 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxa1P35582 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxa1P35582 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxa1P35582 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Foxa1P35582 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.05■□□□□ 0.32
Foxa1P35582 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxa1P35582 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxa1P35582 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.04■□□□□ 0.32
Foxa1P35582 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Foxa1P35582 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxa1P35582 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Foxa1P35582 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxa1P35582 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxa1P35582 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxa1P35582 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxa1P35582 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.04■□□□□ 0.32
Foxa1P35582 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Foxa1P35582 Mir5133-201ENSMUST00000174955 77 ntBASIC17.04■□□□□ 0.32
Foxa1P35582 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.04■□□□□ 0.32
Foxa1P35582 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Foxa1P35582 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Foxa1P35582 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.04■□□□□ 0.32
Foxa1P35582 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms