Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RetP35546 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.25■□□□□ 0.35
RetP35546 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RetP35546 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RetP35546 Gm10812-201ENSMUST00000099864 546 ntBASIC17.25■□□□□ 0.35
RetP35546 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RetP35546 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RetP35546 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RetP35546 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RetP35546 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RetP35546 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RetP35546 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RetP35546 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RetP35546 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.24■□□□□ 0.35
RetP35546 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RetP35546 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RetP35546 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RetP35546 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RetP35546 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RetP35546 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RetP35546 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RetP35546 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RetP35546 Gm13146-201ENSMUST00000118508 780 ntBASIC17.24■□□□□ 0.35
RetP35546 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RetP35546 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.24■□□□□ 0.35
RetP35546 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RetP35546 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RetP35546 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RetP35546 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RetP35546 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RetP35546 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RetP35546 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RetP35546 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RetP35546 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RetP35546 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RetP35546 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RetP35546 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.23■□□□□ 0.35
RetP35546 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RetP35546 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.23■□□□□ 0.35
RetP35546 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.23■□□□□ 0.35
RetP35546 Gm20049-201ENSMUST00000219950 730 ntBASIC17.23■□□□□ 0.35
RetP35546 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.23■□□□□ 0.35
RetP35546 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
RetP35546 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RetP35546 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RetP35546 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RetP35546 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RetP35546 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RetP35546 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RetP35546 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RetP35546 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RetP35546 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RetP35546 Gm7860-201ENSMUST00000121190 879 ntBASIC17.22■□□□□ 0.35
RetP35546 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RetP35546 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RetP35546 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RetP35546 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RetP35546 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RetP35546 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RetP35546 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RetP35546 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RetP35546 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RetP35546 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RetP35546 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RetP35546 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RetP35546 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RetP35546 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RetP35546 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.21■□□□□ 0.35
RetP35546 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RetP35546 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RetP35546 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RetP35546 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RetP35546 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
RetP35546 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RetP35546 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RetP35546 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.21■□□□□ 0.35
RetP35546 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.34
RetP35546 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
RetP35546 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RetP35546 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RetP35546 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RetP35546 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RetP35546 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RetP35546 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RetP35546 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.2■□□□□ 0.34
RetP35546 Gm38205-201ENSMUST00000192243 258 ntBASIC17.2■□□□□ 0.34
RetP35546 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RetP35546 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RetP35546 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RetP35546 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RetP35546 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RetP35546 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.19■□□□□ 0.34
RetP35546 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RetP35546 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RetP35546 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RetP35546 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RetP35546 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.19■□□□□ 0.34
RetP35546 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RetP35546 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.19■□□□□ 0.34
RetP35546 Gm6420-201ENSMUST00000193885 723 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms