Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sftpa1P35242 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Sftpa1P35242 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sftpa1P35242 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sftpa1P35242 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sftpa1P35242 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sftpa1P35242 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sftpa1P35242 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sftpa1P35242 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sftpa1P35242 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Sftpa1P35242 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sftpa1P35242 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sftpa1P35242 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.1■□□□□ 0.33
Sftpa1P35242 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sftpa1P35242 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.09■□□□□ 0.33
Sftpa1P35242 Gm21814-202ENSMUST00000203277 873 ntBASIC17.09■□□□□ 0.33
Sftpa1P35242 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.09■□□□□ 0.33
Sftpa1P35242 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sftpa1P35242 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sftpa1P35242 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.09■□□□□ 0.33
Sftpa1P35242 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sftpa1P35242 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sftpa1P35242 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sftpa1P35242 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.09■□□□□ 0.33
Sftpa1P35242 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
Sftpa1P35242 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sftpa1P35242 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.08■□□□□ 0.32
Sftpa1P35242 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Sftpa1P35242 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sftpa1P35242 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sftpa1P35242 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Sftpa1P35242 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Sftpa1P35242 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sftpa1P35242 Gm7367-201ENSMUST00000057611 492 ntBASIC17.08■□□□□ 0.32
Sftpa1P35242 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sftpa1P35242 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sftpa1P35242 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.07■□□□□ 0.32
Sftpa1P35242 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.07■□□□□ 0.32
Sftpa1P35242 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Sftpa1P35242 Gm13559-201ENSMUST00000120476 863 ntBASIC17.07■□□□□ 0.32
Sftpa1P35242 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sftpa1P35242 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.07■□□□□ 0.32
Sftpa1P35242 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.07■□□□□ 0.32
Sftpa1P35242 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.07■□□□□ 0.32
Sftpa1P35242 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sftpa1P35242 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sftpa1P35242 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.07■□□□□ 0.32
Sftpa1P35242 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sftpa1P35242 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sftpa1P35242 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.06■□□□□ 0.32
Sftpa1P35242 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sftpa1P35242 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sftpa1P35242 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.06■□□□□ 0.32
Sftpa1P35242 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sftpa1P35242 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sftpa1P35242 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sftpa1P35242 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.06■□□□□ 0.32
Sftpa1P35242 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sftpa1P35242 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.06■□□□□ 0.32
Sftpa1P35242 Gm11539-201ENSMUST00000119837 557 ntBASIC17.06■□□□□ 0.32
Sftpa1P35242 Gm13436-201ENSMUST00000120418 567 ntBASIC17.06■□□□□ 0.32
Sftpa1P35242 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sftpa1P35242 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.06■□□□□ 0.32
Sftpa1P35242 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sftpa1P35242 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Sftpa1P35242 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sftpa1P35242 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sftpa1P35242 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sftpa1P35242 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sftpa1P35242 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Sftpa1P35242 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.05■□□□□ 0.32
Sftpa1P35242 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sftpa1P35242 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sftpa1P35242 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Sftpa1P35242 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sftpa1P35242 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.05■□□□□ 0.32
Sftpa1P35242 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Sftpa1P35242 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sftpa1P35242 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sftpa1P35242 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sftpa1P35242 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sftpa1P35242 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sftpa1P35242 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sftpa1P35242 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sftpa1P35242 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sftpa1P35242 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.04■□□□□ 0.32
Sftpa1P35242 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sftpa1P35242 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sftpa1P35242 Gm7889-201ENSMUST00000185591 958 ntBASIC17.04■□□□□ 0.32
Sftpa1P35242 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.04■□□□□ 0.32
Sftpa1P35242 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Sftpa1P35242 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Sftpa1P35242 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sftpa1P35242 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Sftpa1P35242 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sftpa1P35242 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sftpa1P35242 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sftpa1P35242 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sftpa1P35242 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.03■□□□□ 0.32
Sftpa1P35242 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms