Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp13P33435 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.87■□□□□ 0.61
Mmp13P33435 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Mmp13P33435 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp13P33435 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp13P33435 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp13P33435 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp13P33435 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp13P33435 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp13P33435 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp13P33435 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.87■□□□□ 0.61
Mmp13P33435 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp13P33435 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.87■□□□□ 0.61
Mmp13P33435 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp13P33435 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.86■□□□□ 0.61
Mmp13P33435 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp13P33435 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp13P33435 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp13P33435 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp13P33435 Gm7860-201ENSMUST00000121190 879 ntBASIC18.86■□□□□ 0.61
Mmp13P33435 Gm18671-201ENSMUST00000214826 683 ntBASIC18.86■□□□□ 0.61
Mmp13P33435 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp13P33435 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp13P33435 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp13P33435 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.86■□□□□ 0.61
Mmp13P33435 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp13P33435 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp13P33435 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp13P33435 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.85■□□□□ 0.61
Mmp13P33435 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp13P33435 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp13P33435 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Mmp13P33435 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp13P33435 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp13P33435 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp13P33435 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.85■□□□□ 0.61
Mmp13P33435 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp13P33435 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp13P33435 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp13P33435 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp13P33435 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp13P33435 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp13P33435 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp13P33435 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp13P33435 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.84■□□□□ 0.61
Mmp13P33435 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp13P33435 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.84■□□□□ 0.61
Mmp13P33435 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp13P33435 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.84■□□□□ 0.61
Mmp13P33435 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp13P33435 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.84■□□□□ 0.61
Mmp13P33435 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp13P33435 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Mmp13P33435 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp13P33435 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.84■□□□□ 0.61
Mmp13P33435 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp13P33435 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Mmp13P33435 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp13P33435 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp13P33435 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp13P33435 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp13P33435 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mmp13P33435 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Mmp13P33435 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mmp13P33435 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mmp13P33435 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mmp13P33435 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Mmp13P33435 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mmp13P33435 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.83■□□□□ 0.6
Mmp13P33435 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp13P33435 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp13P33435 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp13P33435 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Mmp13P33435 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp13P33435 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp13P33435 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Mmp13P33435 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp13P33435 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp13P33435 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Mmp13P33435 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Mmp13P33435 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Mmp13P33435 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp13P33435 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp13P33435 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.82■□□□□ 0.6
Mmp13P33435 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Mmp13P33435 Gm42569-201ENSMUST00000200539 472 ntBASIC18.82■□□□□ 0.6
Mmp13P33435 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp13P33435 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Mmp13P33435 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Mmp13P33435 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp13P33435 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Mmp13P33435 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp13P33435 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp13P33435 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp13P33435 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp13P33435 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp13P33435 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp13P33435 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp13P33435 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp13P33435 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms