Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Vcam1P29533 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Vcam1P29533 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Vcam1P29533 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vcam1P29533 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vcam1P29533 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vcam1P29533 Gm38285-201ENSMUST00000192928 922 ntBASIC21.35■■□□□ 1.01
Vcam1P29533 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vcam1P29533 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Vcam1P29533 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
Vcam1P29533 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.34■■□□□ 1.01
Vcam1P29533 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vcam1P29533 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vcam1P29533 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.34■■□□□ 1.01
Vcam1P29533 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.34■■□□□ 1.01
Vcam1P29533 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vcam1P29533 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vcam1P29533 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vcam1P29533 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.34■■□□□ 1.01
Vcam1P29533 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vcam1P29533 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Vcam1P29533 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
Vcam1P29533 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.33■■□□□ 1.01
Vcam1P29533 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.33■■□□□ 1.01
Vcam1P29533 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vcam1P29533 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vcam1P29533 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vcam1P29533 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vcam1P29533 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.33■■□□□ 1
Vcam1P29533 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Vcam1P29533 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vcam1P29533 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.32■■□□□ 1
Vcam1P29533 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.32■■□□□ 1
Vcam1P29533 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.32■■□□□ 1
Vcam1P29533 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.32■■□□□ 1
Vcam1P29533 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.32■■□□□ 1
Vcam1P29533 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vcam1P29533 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Vcam1P29533 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Vcam1P29533 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vcam1P29533 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.32■■□□□ 1
Vcam1P29533 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.32■■□□□ 1
Vcam1P29533 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vcam1P29533 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vcam1P29533 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Vcam1P29533 Gm37055-201ENSMUST00000191866 133 ntBASIC21.31■■□□□ 1
Vcam1P29533 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vcam1P29533 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.31■■□□□ 1
Vcam1P29533 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.31■■□□□ 1
Vcam1P29533 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.31■■□□□ 1
Vcam1P29533 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vcam1P29533 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Vcam1P29533 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.3■■□□□ 1
Vcam1P29533 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vcam1P29533 Gm10138-203ENSMUST00000206952 366 ntBASIC21.3■■□□□ 1
Vcam1P29533 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.3■■□□□ 1
Vcam1P29533 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Vcam1P29533 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vcam1P29533 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.3■■□□□ 1
Vcam1P29533 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vcam1P29533 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
Vcam1P29533 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vcam1P29533 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vcam1P29533 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vcam1P29533 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Vcam1P29533 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vcam1P29533 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vcam1P29533 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vcam1P29533 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vcam1P29533 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Vcam1P29533 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vcam1P29533 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.29■■□□□ 1
Vcam1P29533 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vcam1P29533 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Vcam1P29533 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.29■■□□□ 1
Vcam1P29533 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Vcam1P29533 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vcam1P29533 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.29■■□□□ 1
Vcam1P29533 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.29■■□□□ 1
Vcam1P29533 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.29■■□□□ 1
Vcam1P29533 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vcam1P29533 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vcam1P29533 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Vcam1P29533 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vcam1P29533 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vcam1P29533 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Vcam1P29533 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vcam1P29533 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.28■■□□□ 1
Vcam1P29533 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.28■■□□□ 1
Vcam1P29533 Gm15565-201ENSMUST00000118890 427 ntBASIC21.28■■□□□ 1
Vcam1P29533 Mir5122-201ENSMUST00000175004 89 ntBASIC21.28■■□□□ 1
Vcam1P29533 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vcam1P29533 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vcam1P29533 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Vcam1P29533 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Vcam1P29533 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.28■■□□□ 1
Vcam1P29533 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vcam1P29533 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vcam1P29533 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Vcam1P29533 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms